Gene Psyc_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1353 
SymbolnonF 
ID3515310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1630971 
End bp1631648 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content43% 
IMG OID637670039 
ProductThiJ/PfpI family protein 
Protein accessionYP_264635 
Protein GI71065908 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTT TAATGGTACT AACTTCACAC GATAAATTGG GCGATACTGG TAAGAAGACA 
GGCTTTTGGC TAGAAGAATT TGCCGCACCT TACTATGCTT TTTTAGATGC TGGTGTCAAT
ATCACGCTTG CCTCTCCTGC GGGCGGTCAA CCACCACTTG ACCCAAGTAG TGACACACCA
GATGCTCAAA CCAAAGATAC CAAACGCTTT AAAGAAGACT CTGAAGCACA AGAACACCTA
GCAACGACCA AAAAACTTGC TGATATGAAA GCGGAAGATT TTGATTCAGT ATTCTATCCT
GGTGGTCATG GTCCAATGTG GGATTTAGCC GTTGACAAAA ACTCGATTGA ATTAATTGAG
ACATTCATCA AACAAGACAA ACCAGTAGCT TTTGTCTGCC ATTCTCCTGC CGCCCTTAAA
AACGTTAAAA TCGATGGCGA GTATCTGGTC AAAGGAAAAA CGGTCACAGG CTTTAGTAAT
ACTGAAGAAG AAGCGGTTCA GCTTACTGAT GTCGTGCCTT TCTTATTAGA GGACGTGCTA
AAAGCCAATG GTGGTAACTA TGAAAAAGGT ACTGATTGGG AGTCGTTTGT GGTCGAAGAC
GGCTTGTTGA TCACTGGTCA AAATCCAGCG TCATCAGAAG AAGCCGCCAA GCGCTTAATT
GCTAAGATAC AGGCTTAA
 
Protein sequence
MNILMVLTSH DKLGDTGKKT GFWLEEFAAP YYAFLDAGVN ITLASPAGGQ PPLDPSSDTP 
DAQTKDTKRF KEDSEAQEHL ATTKKLADMK AEDFDSVFYP GGHGPMWDLA VDKNSIELIE
TFIKQDKPVA FVCHSPAALK NVKIDGEYLV KGKTVTGFSN TEEEAVQLTD VVPFLLEDVL
KANGGNYEKG TDWESFVVED GLLITGQNPA SSEEAAKRLI AKIQA