Gene Psyc_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1348 
Symbol 
ID3515305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1625133 
End bp1626386 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content44% 
IMG OID637670034 
Producthypothetical protein 
Protein accessionYP_264630 
Protein GI71065903 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3213] Uncharacterized protein involved in response to NO 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCTA TCAATTTACC CAGTAAACCA CCAAACTCTC CACATCCTAT CCTTAATTTA 
AGTTTTCGGA TATTTTTTAG TGCTGGGGCA TTGTTTGCCA TAATAACGAT GACGTTATGG
GCATGTGTCT TTACCGGACA TACGGCTATC GATGCGCAAA CGTTGAATCC ACTATATTGG
CACGGTCATG AGATGATTTA TGGCTATGCG TTAGCCATCG TTGCAGGGTT TTTGCTAACA
GCGGTAAAGA CGTGGACCGG CGTCATGATG CCATACGGCT ATAAACTGTT AGGCATTTTT
ATGTGCTGGT TGCTGGCGCG TTTGGGCTGG ATAGCGTTTG GTTTAGGGAT TGATATTGGT
CTTGAACAAA GTGCTTGGTT ATATATCGCT GCGGTGTTTG ATTTGTTGTT TTTTGGCTCA
ATGGCTTTTG TGATTTTTAG GGCAGTGTGG CAAGTTAAAC AGTATAAGCA GATGGGTATT
TTAGCAAAGC TTACGCTACT GACGCTCGGC AATGGATTAT GCTATTGGGG CATTATTAGC
GCCAATACGA CGATGACAAA AATTGGTGTT TATTTGGGTT TTTATCTTAT CATTGGCTTG
GTATTGACTA TGGGTCGCCG CGTCGTGCCG TTCTTTATTG AGCGCGGTTT GAGTATTCCG
AATGCAGCGG GCGTGGCAGA AACGGTGACG GTACGAAATA GTAAGGCGCA AGATATCGCA
AGTTTGCTAT TTTTCTTCAC CTTTTTTATC ACTGATTTAT TTTATCCCAA TAAATATTTG
CTGACCATCA GCGCCCTTGG CGTGGCAGTC GTCAATATCG TACGCTTAAT GGGTTGGTAC
CATCACGGTA TTTGGCACAA GCCTTTATTA TGGTCGCTGT TTGTTGCGTT TTTCGGGATG
TGTGTGAGCT TTATATTGTA CGCGCTACAG CCGTGGTTCG GTTACAATCA TAGTATTGGC
GTACATGGAT TGGCAATTGC CGGTGTTGGT ATGACGACGG TGGCAATGAT GGCACGTGTG
TCGCTTGGGC ATACAGGACG TAGCATTCAT GAGCCACCCA AAACGGTCAC TGTCATGTTT
GCATTGATGG TATTGGTATT TATCAGCCGT GTACTGTTGC CATTAGTAGA TAACAGCCAT
TATTTATGGT GGATAATGGT CGCGCAAGGA GCTTGGATTT CCTGCTTTGT ATTATTTTGC
AGCAGCTATC TGCGTATTCT AACAAACCCG CGTCCAGATG GTTTATTTGG TTAA
 
Protein sequence
MQAINLPSKP PNSPHPILNL SFRIFFSAGA LFAIITMTLW ACVFTGHTAI DAQTLNPLYW 
HGHEMIYGYA LAIVAGFLLT AVKTWTGVMM PYGYKLLGIF MCWLLARLGW IAFGLGIDIG
LEQSAWLYIA AVFDLLFFGS MAFVIFRAVW QVKQYKQMGI LAKLTLLTLG NGLCYWGIIS
ANTTMTKIGV YLGFYLIIGL VLTMGRRVVP FFIERGLSIP NAAGVAETVT VRNSKAQDIA
SLLFFFTFFI TDLFYPNKYL LTISALGVAV VNIVRLMGWY HHGIWHKPLL WSLFVAFFGM
CVSFILYALQ PWFGYNHSIG VHGLAIAGVG MTTVAMMARV SLGHTGRSIH EPPKTVTVMF
ALMVLVFISR VLLPLVDNSH YLWWIMVAQG AWISCFVLFC SSYLRILTNP RPDGLFG