Gene Psyc_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1336 
Symbol 
ID3515293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1616706 
End bp1617689 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content39% 
IMG OID637670024 
Producthypothetical protein 
Protein accessionYP_264620 
Protein GI71065893 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000287065 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCAA TTATGCAGAT TTTCCTTGCT CGAAATAACG TACAAGCCGG TCCATATACC 
TTGGATCAGC TCAACATCAT GCTCACCTCT GGTGAGGTGC TATTAGATGA TTTGGTCTGG
CATGAAGGTT TAGATCAGTG GCAGCGCGTG GGCAACTTGA CTAACAATCA ACCCTTTTAT
CGCCCAACTC ATGTAGCAAT GCCTGAAGTT AATGACTCTA TCATTAACAA CGTCACTGTG
TTTCCAGAAG ACGCTGAAAC AGATGCTAAT AAAGGTAACC AATCAGTATC GCTAGATCGT
CTATATGGCA AGCCTGAACG TTCAATAGAC ACTGCTAAAA ATACCAAAGC AGACATGACG
ACCAATCGTC ACTATAAGCC AAATAGCAAT GTCTCATTGA ATAAGTCTGG TGCTGCTAAT
GCTACTTCAG CGAAAGATAA GGTAGTGGGT AATGTGGTAC TGGCTCCGAT CATGTCACGC
CTATTAGCCA CAGCTATTGA CTGGCTATTA CTGATTATTG CATTTTTACC TTTATTTATG
GCTATAAATA AGCTGGGTGG TTTTCCTACA GACTTAGCGA GTATAGATCA AATGCTCGCT
TTCTCTGTAA ACTTAGCCGA AAAAATACCG CAAAGCACAC AGCTGATATC GAATGTTATG
TTGTTTGGCT TTGTTATTAT ACAACTAGTA TTTATTATTT TACGGGGACA GTCGATAGGT
AAAGTTATTA CAGGTATTCG GATAGTCGAT CAAACTACGC ACCATTTACC TTCTTTTTTT
AGACTAGTAG TCATGCGTAC TATTTTATTA ATACTTATCT ATTTACCTTT TTTTACTACC
TTTATAGCCG CTCTGTTGTT AGCAGTGAAT TATTATTTGG CCTCTAAAAG CTCTAAAAAT
ATCGGTTGGC ATGATAAATT GGCCAAAACT TTGGTGGTCA AAGCTGATAG CAGTCAATTG
GTAAAAGAGC CAAAAATAAA ATAA
 
Protein sequence
MQAIMQIFLA RNNVQAGPYT LDQLNIMLTS GEVLLDDLVW HEGLDQWQRV GNLTNNQPFY 
RPTHVAMPEV NDSIINNVTV FPEDAETDAN KGNQSVSLDR LYGKPERSID TAKNTKADMT
TNRHYKPNSN VSLNKSGAAN ATSAKDKVVG NVVLAPIMSR LLATAIDWLL LIIAFLPLFM
AINKLGGFPT DLASIDQMLA FSVNLAEKIP QSTQLISNVM LFGFVIIQLV FIILRGQSIG
KVITGIRIVD QTTHHLPSFF RLVVMRTILL ILIYLPFFTT FIAALLLAVN YYLASKSSKN
IGWHDKLAKT LVVKADSSQL VKEPKIK