Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1335 |
Symbol | ppsA |
ID | 3515292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1614150 |
End bp | 1616534 |
Gene Length | 2385 bp |
Protein Length | 794 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637670023 |
Product | phosphoenolpyruvate synthase |
Protein accession | YP_264619 |
Protein GI | 71065892 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000416419 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGCGC AATCTACAGC ACTTGTAATT AACCTTGATC AGTTAGGAAA AGACGACATT GAAATGGTCG GTGGCAAAAA CGCTTCACTT GGTGAAATGA TCAGCCATCT ATCTGATTTG GGCGTTAGTG TTCCAGGCGG CTTTGCCACA ACTTCAAATG CTTTTAACCA GTTTCTAACA GAAACTGGCT TACTTGACAA AATTAACAGC GAGCTTAAAA CCTTAGATGT TAACGATGTC AACAAACTTG CTGAAACTGG CAAAAAAATC CGTACTTGGA TTATTGAGCA AGAACTGCCA AAAGATCTTG AGCAAGCAGT GCGTGAATCA TTTGAAGAGA TGAGCGATGG TAAAGAGATT GCGGTTGCTG TACGTTCTTC TGCGACTGCT GAAGATTTGC CAGATGCCTC ATTTGCTGGT CAGCAAGAAA CTTTCTTGAA TATTCGTGGT ATTGATAACG TCCTTATTGC GATTAAAGAA GTATTTGCTT CTCTTTATAA TGACCGCGCG ATCTCTTATC GTGTACACAA AGGCTTTGAG CACGAAGGCG TTGCTTTATC TGCTGCCGTA CAGCGTATGG TACGTTCAGA AACTGGCGCG GCTGGTGTTA TGTTCACGCT AGATACAGAA AGTGGCTTTG ATCAAGTGGT CTTCATCACC TCAAGCTATG GCTTGGGTGA GATGGTCGTG CAAGGCGCGG TAAACCCTGA TGAATTCTAT GTGTCAAAGC AATTACTTGC TAACGGCAAA CCTGCGATTA TTCGTCGCAA CCTAGGTAGC AAGCATAAGA AAATGATTTA TGGTGATGAA GGTAGTACCA CTAAATCTGT AAAAGTCATT GACGTCGAAA AACAAGATCG TATGCAGTTC TCTTTATCGA CTGAAGAGCT GACTTCACTT GCCAAGCAAG CGATGACCAT TGAAAAACAT TATGGTCAAG CGATGGATAT TGAGTGGGCA AAAGACGGCG ATACCAATGA AATCTTTATC GTTCAAGCCC GTCCTGAAAC GGTTAAGAGT CGTCAAGACA GTAATGTCAT GGAACGTTAT ATCATCGACA CGACTAACGC TAAAGTGTTG TGCGAAGGTC GCTCAATTGG TCAACGTATC GGTTCAGGTA AAGTCCGTAT CGTTAGCAAC CTAAATGAGA TGGACAAAGT ACAAGAAGGC GATGTATTGG TATCAGACAT GACGGATCCA GATTGGGAAC CAGTCATGAA GCGTGCTTCT GCTATCATTA CTAACCGTGG CGGTCGTACT TGTCACGCGG CGATTATCGC TCGTGAGCTA GGTGTTCCAG CAATCGTTGG TTGTGGTAAT GCTACTGAGC TATTGGTTGA TGGTCAAGAC GTGACTGCTT CTTGTGCTGA AGGTGATACT GGCTTCATTT ATGAAAGTCA AATCGACTTT GAAATACAGA CCAACTCTGT TGAGTCTATG CCAGAGCTTG CCTTTAAAGT GATGATGAAC GTCGGTAATC CAGATCGCGC CTTCTCATTT ACTCAAATGC CAAACGAAGG TATCGGTCTT GCCCGTCTTG AATTCATCAT TAACCGTATG ATTGGTGTGC ATCCAAAAGC GCTACTGAAC ATGAACAGCT TGCCGCGTGA AATTGCGCAA GCCATCAATG AGCGTATCGC GGGTTATGCC TCACCAGTTG ATTTTTATGT TGATAAATTG GTTGAAGGTA TCTCAACCCT AGCCGTTGCC TTTATGGATC AGCCAGTAAT CGTTCGTATG TCGGATTTCA AATCTAACGA ATATGCTAAC TTGCTAGGTG GTAAGCTGTA CGAGCCATCA GAAGAAAACC CAATGCTTGG TTTCCGCGGT GCTAGCCGTT ATGTGTCTGA CAATTTCCGT GACTGCTTTG AGCTTGAGTG TAAAGCGCTA AAGCGTGTAC GCGATGAGAT GGGCTTGACC AACGTCGAGA TCATGATTCC ATTCGTACGT ACCGTGGGCG AAGCCAAACA AGTCATCGAG TTACTTGAGA AAAATGGTCT AAAACGTGGT GAAAACGGTC TACGCATTAT CATGATGTGT GAGCTACCAA CCAACTGCTT ACTTGCAGAA GAGTTCCTAG AGCACTTTGA TGGTTTCTCA ATCGGTTCAA ACGATTTGAC ACAGTTGACC TTAGGTCTTG ACCGTGACTC AGGTATCGTC TCACATCTAT TTGATGAGCG TGATCCTGCG GTTAAAAAGC TGTTGTCTAT GGCGATTGAT GCTTGTCGCA AGCAAAACAA GTATGTCGGT ATCTGTGGTC AAGGTCCTTC AGACCATCCA GATCTTGCTT ACTGGCTTAT GGAACAAGGC ATCAGCTCAG TGTCATTAAA CCCTGACTCA GTACTAGATA CTTGGTTCTT CTTAGCGGGT GAAGAAGCGA AGTAA
|
Protein sequence | MAAQSTALVI NLDQLGKDDI EMVGGKNASL GEMISHLSDL GVSVPGGFAT TSNAFNQFLT ETGLLDKINS ELKTLDVNDV NKLAETGKKI RTWIIEQELP KDLEQAVRES FEEMSDGKEI AVAVRSSATA EDLPDASFAG QQETFLNIRG IDNVLIAIKE VFASLYNDRA ISYRVHKGFE HEGVALSAAV QRMVRSETGA AGVMFTLDTE SGFDQVVFIT SSYGLGEMVV QGAVNPDEFY VSKQLLANGK PAIIRRNLGS KHKKMIYGDE GSTTKSVKVI DVEKQDRMQF SLSTEELTSL AKQAMTIEKH YGQAMDIEWA KDGDTNEIFI VQARPETVKS RQDSNVMERY IIDTTNAKVL CEGRSIGQRI GSGKVRIVSN LNEMDKVQEG DVLVSDMTDP DWEPVMKRAS AIITNRGGRT CHAAIIAREL GVPAIVGCGN ATELLVDGQD VTASCAEGDT GFIYESQIDF EIQTNSVESM PELAFKVMMN VGNPDRAFSF TQMPNEGIGL ARLEFIINRM IGVHPKALLN MNSLPREIAQ AINERIAGYA SPVDFYVDKL VEGISTLAVA FMDQPVIVRM SDFKSNEYAN LLGGKLYEPS EENPMLGFRG ASRYVSDNFR DCFELECKAL KRVRDEMGLT NVEIMIPFVR TVGEAKQVIE LLEKNGLKRG ENGLRIIMMC ELPTNCLLAE EFLEHFDGFS IGSNDLTQLT LGLDRDSGIV SHLFDERDPA VKKLLSMAID ACRKQNKYVG ICGQGPSDHP DLAYWLMEQG ISSVSLNPDS VLDTWFFLAG EEAK
|
| |