| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1259 |
|---|
| Symbol | dnaG |
|---|
| ID | 3515216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 1513396 |
|---|
| End bp | 1515558 |
|---|
| Gene Length | 2163 bp |
|---|
| Protein Length | 720 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637669947 |
|---|
| Product | DNA primase |
|---|
| Protein accession | YP_264543 |
|---|
| Protein GI | 71065816 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0358] DNA primase (bacterial type) |
|---|
| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.917383 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATCC CAAATCACAT TCTTGAGCAA TTAAATAGCC AAGCTGACTT AGTCAGTATC
ATTGGGCGTC ATACTACGCT TAAACGTGCT GGCGGTGAGT TTAAAGGCTG CTGCCCTTTT
CATGGCGAAA AGTCGCCGTC TTTTTATGTC AATCCACAAA AAAATATCTA TCACTGCTTT
GGCTGTAGTG TCGGTGGCAA TGCCATCAGC TTTTTACGTG ATTATGAAAA CTTGACCTTT
ATCGAAGCGG TCAATGAGCT GTCCAAACAG ACGGGCATTG AAGTCCCAAA AGAAGAGCAA
CAAAACGTCA GCTATCAGCG TGCCAAACCC AAGCCAAAAT CTGCTATTAA GCCAGCAACA
TCAGCAACGC ATCTGCAAAA AAATGATAGT CAGCCAGTAA CCAATAATAA GTCATCCATG
AGCATGCCAG CTGATGATAC GCAGCCGCCA ACTTATGATG ACCACCATAG TTATGACAAT
TATCCACCGT TAGATGCTTA CGATGCCGTC CCTTATGCAA TGGATGGCTA TGATGCTCAC
TATCAAGATG ATGATAATTA CCCGCCTGCG TGGTTGGCAG GTGGTGATAT GGCAGGCTTG
CATGGCAGTG ATATAAATCA TAGTTTTGAT AATAACAATG ACAGCAATGA AGACGGCAAC
CTATACGATC TGTTAGAAAA AATACAGCAA TTTTATCAGC ACAATCTCAG CATCCACCCT
CATGCCAAGC ATTATTTTTT ATCGCGCGGT ATTAGCGATG AAATCTTTGA AACTTTTGGC
TTGGGCTACG CGCCTTTTGG TTGGCAGCAT CTTGAACATC AGTTTCCGCA AGATATTGAA
GGCTTAAAGG CGCTTGGCTT AGTGCGGCGC TCAGAGTCCG GACGCGATTA TGACCTGCTT
CGTGATCGGG TTATTTTCCC GATTCGAGAC AATCAAGGGC GTACCATTGG TTTTGGTGGT
CGCGCGCTTG ATGATGAGGT AAAGCCCAAA TATATCAACT CCTCTGACTC GCCCGTCTTT
CATAAGCAGC ACGTGCTGTA TGGCTATTAC GAATCACGCC AAAAACGCTC AAATGACTGG
CTGGTGGTCG AAGGCTATAT GGATGTGATT GCCCTGTATC AAGTCGGTAT TTATGGTGCC
ATTGCGTCGA TGGGCACAGC AATTAATGAG AGCCAAATCT CACGTCTATT AACGCTAAAT
CCCACCCTAA CCTTAAGTTT TGATGGTGAT AGCGCTGGAC AAAAAGCCGC TTGGCGCACG
CTTGAAGTGG CACTACCTGT GCTCAGTGAC GAAAAAGAGC TGCGCTTTTT AACGCTACCC
AACAATCATG ACCCTGATAC CTTTATAAAA AGTCAGGGCG CGGATGCCAT GCGTGAGCAA
ATCGTAAACG CCATGCCGTT ATCACAGTAT ATCTTTGCCT ATCTAAGTGA GCGTCATGAT
TTGACCTTGG TTGAAGGTAA AGCCAAGCTC ATGTCACAAG TGCGCGCTTT GACTACTGCC
TTACCAAAAG GTAGTAGCTT CCGCTACCTG CTCAATAATG ACATTTATCA AAAGCTTGGT
GGCAAACGTA GCCAAAACAT CGAAGCCAAA GATGCCCTGC TAGATTTTGA TGGTGAAATG
ACCATCAGTC AGCAGCTGCA ACTGTGCTTT GTATTCCAGC CGCGTATCTT GATTGATGAT
CCTATCGAAG CCATTTGGCA ACAAGCCGGT ATTAATGACT TACACCTGCC CGCTCATCTT
CAGCAAAAAG CCTCGGCTGA TGTTTTACGC CCGCTGGCTT GGGAAGATAT GCAGGACGCG
GCACTACTTG ATGTCGTCAG CACTATTAAG CGCTGCCTGA ATTATTTGCC AAAAGATGCC
AATGCGGCGG CGCACTTTAT TCTCTCTAAC GTCAAACCCT TGACCCAAGA GACGCTTAGC
CGCGACTGGG GCAGCTTTTA TAAAGCCTTG ACCAGCCGTA ATATCTTGAG CCTTGATGGT
TTGGTCGAAG AGTTGGTCAG CCAACTGATC GAACGTCATA TGAAGAAGAA AACACAAGAT
TTGATTAAGA ATCCTGACAA CATAAAACTG GCGATTGTCC GTAAACAATC ACAGTTATTA
AATGACTGGC TACGCGCGCA GCAAGCAGAG CAATCTGCCC AGATGGCGAC GGTTAAATCT
TAA
|
|---|
| Protein sequence | MSIPNHILEQ LNSQADLVSI IGRHTTLKRA GGEFKGCCPF HGEKSPSFYV NPQKNIYHCF
GCSVGGNAIS FLRDYENLTF IEAVNELSKQ TGIEVPKEEQ QNVSYQRAKP KPKSAIKPAT
SATHLQKNDS QPVTNNKSSM SMPADDTQPP TYDDHHSYDN YPPLDAYDAV PYAMDGYDAH
YQDDDNYPPA WLAGGDMAGL HGSDINHSFD NNNDSNEDGN LYDLLEKIQQ FYQHNLSIHP
HAKHYFLSRG ISDEIFETFG LGYAPFGWQH LEHQFPQDIE GLKALGLVRR SESGRDYDLL
RDRVIFPIRD NQGRTIGFGG RALDDEVKPK YINSSDSPVF HKQHVLYGYY ESRQKRSNDW
LVVEGYMDVI ALYQVGIYGA IASMGTAINE SQISRLLTLN PTLTLSFDGD SAGQKAAWRT
LEVALPVLSD EKELRFLTLP NNHDPDTFIK SQGADAMREQ IVNAMPLSQY IFAYLSERHD
LTLVEGKAKL MSQVRALTTA LPKGSSFRYL LNNDIYQKLG GKRSQNIEAK DALLDFDGEM
TISQQLQLCF VFQPRILIDD PIEAIWQQAG INDLHLPAHL QQKASADVLR PLAWEDMQDA
ALLDVVSTIK RCLNYLPKDA NAAAHFILSN VKPLTQETLS RDWGSFYKAL TSRNILSLDG
LVEELVSQLI ERHMKKKTQD LIKNPDNIKL AIVRKQSQLL NDWLRAQQAE QSAQMATVKS
|
|---|
| |