| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1253 |
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| Symbol | tolB |
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| ID | 3515210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1504345 |
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| End bp | 1505637 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637669941 |
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| Product | TolB periplasmic receptor |
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| Protein accession | YP_264537 |
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| Protein GI | 71065810 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0142198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.831456 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCACTC ATAAAAAACT ACTCACCTCG TTACTTGCTA GCGCCTCAAG CTTGCTTATC
GCGCCAAGTG TATTGGCAGC GCCTGTCATT TTAGAGTTGG ATTACGAGAT TCCTGTTCAA
CAAAACCAAG TGGCTTTTGT GCCTTTTGCT GGTGATAGTG TGTTATCACC TATTATTGTA
AACGACTTAA GCAAAACTGA GCTCAAAATT ACCAGTCAGA ATCTACCGCA GCAGCCGCGC
AGTAGCAGCG AGCTGTCAGG AACATTACCT GTATGGCAAA GTATGGGTAT TCCCTATCTT
GTCGTGGGTA GCACCCGCAG TAGCCGCGGT AAAGTGGTGA CCGATTATGA AGTGATTGAG
GTTAAAACAG GACGCGTTAT CGAAGGCAAG CAAACTTTAA CCACTGATAA CAACAAAGAT
AGCATGCGCT ATGCCGGTCA CGTCATCGCA GATAAAGTTT ATGAGCTCAT TACCGGCATT
CCAGGTGACT TCTCAGGGCG TATTGCTTAT ATTGAAGAAA TTGGTGCAGG AAAAGCAAAA
GTCTCACGCT TAAAAATCAT GGATGCCGAT GGTGAAAACG CCAAAACCAT TACCGAAGTT
TCAGGCTCTA TCTTCTCCCC AGCATGGTCG CCTGATGGCA ACCGTATTGC CTATGCGGTA
CAACGCGATA AATCATATCC TGTCATTTAT GTACAAAGCG TGAGCGGCGG CGGCGCAACG
CCATTGACCC CTTTCCCTGG TAGTAACTTA AGTCCTTCAT TCTCACCAGA TGGCAGCAAA
ATACTGTTCT CTAGTAGCTT TGAGGGCAGC GCTGATATTT ATGAGATGAG TGCCAGCGGC
GGTCAACCAA GAAGACTCAC CAACTGGCCA AGCAGTGAAG TACAGCCAAG CTACGCTCCT
GATGGCAGAT CTTTTGTCTT TGTGTCTGAT AAAGCTGGAT TTAATAAACC ACAGATTTAT
CGTTATGAGT TTGGTTCGGG ACGTACAACC AAGGTGTCCA ATAGTGGTTA TGCGACCAGC
CCTCAATTCA GTAGCGATGG CTCACAGATT GCCTTTTTAA ATGGTCGCTC AGCTGCCATC
ATGAATAGCG GCGGCGCGGT CACTGCCAAT TTAGGTAATA CCGGCATTGA TGAAGCACCG
AGCTTTTCGC CTAATGGTAA GCGCGTCGTT TATGCCTCAA AGCAAGGTGG TAAAGGCGTA
CTAACTATCA AATCCCTAAA TGGTGGCGAA GCCTTTGGTA AATCTGGGCA AGGCGTTATC
CGTTCACCTG TCTGGTCAGC CAGTCCCAGA TAA
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| Protein sequence | MRTHKKLLTS LLASASSLLI APSVLAAPVI LELDYEIPVQ QNQVAFVPFA GDSVLSPIIV
NDLSKTELKI TSQNLPQQPR SSSELSGTLP VWQSMGIPYL VVGSTRSSRG KVVTDYEVIE
VKTGRVIEGK QTLTTDNNKD SMRYAGHVIA DKVYELITGI PGDFSGRIAY IEEIGAGKAK
VSRLKIMDAD GENAKTITEV SGSIFSPAWS PDGNRIAYAV QRDKSYPVIY VQSVSGGGAT
PLTPFPGSNL SPSFSPDGSK ILFSSSFEGS ADIYEMSASG GQPRRLTNWP SSEVQPSYAP
DGRSFVFVSD KAGFNKPQIY RYEFGSGRTT KVSNSGYATS PQFSSDGSQI AFLNGRSAAI
MNSGGAVTAN LGNTGIDEAP SFSPNGKRVV YASKQGGKGV LTIKSLNGGE AFGKSGQGVI
RSPVWSASPR
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