Gene Psyc_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1245 
SymbolpurB 
ID3515202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1493956 
End bp1495347 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content43% 
IMG OID637669933 
Productadenylosuccinate lyase 
Protein accessionYP_264529 
Protein GI71065802 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00902866 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.920871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAC TTACCGCCCT ATCCCCAATC GATGGTCGTT ATGCGTCCAA AGCCGATAGC 
TTGCGCCCTT ACTTATCTGA ATTTGGTCTG ATTAAAGCGC GCGTTACCGT TGAGATTCGC
TGGTTACAGT CATTGGCTGA TAATAGTGCC ATTGGTGAGT TAGCAGCATT TGATACCGAT
ACCAATGCGT TTTTAAATGC TATCGTTGAT AACTTTAGCG AAGCAGATGC CCAAGCGATT
AAAGACATAG AAGCAACCAC CAATCATGAT GTAAAAGCAG TTGAGTACTT TATTAAAGAC
AAATTCCGTG GTCAGGCAGC GCTTGAAGAT TCATTAGAAT TTATTCATTT TGCTTGTACC
AGTGAAGATA TTAACAACCT ATCATACGCA TTAATGCTAA AAGACAGCCG CGAAATCGTC
GTTGCCAAAA TGCAAGAAGT GACGGATAGT ATTGTTGATT TAGCGATTAC CTATGCTGAC
CAACCGATGT TATCACGTAC CCATGGTCAA ACCGCTAGCC CAACGACTTT GGGTAAAGAG
ATGGCAAACG TGGCTTATCG TCTAGCCCGT CAAATCAAGC AGGTTGGTCA GGTTGAACTA
CTTGGTAAAA TCAATGGCGC AGTTGGTAAC TATAACGCTC ATTATGCCTC ATATCCTGAT
GTTGATTGGC AAGTTCATGC TGAACAATTT ATCAACGATA GCTTAGCATT GACGTTTAAC
CCGTACACCA CGCAAATTGA ACCGCATGAT TATATCGCTG AATTGTTCGA TGCGGTAAAA
CGTTTCAACA CTATTCTAAT CGATTTTAAT CGTGATATTT GGCAATATAT TAGCTTAGGC
TATTTTAAAC AGCGCCTAAA AGAGGGTGAA GTTGGCTCTT CTACCATGCC GCATAAAGTG
AACCCGATCG ACTTTGAAAA CTCGGAAGGT AACTTGGGCG TTGCTAATGC GATGCTTGCT
CATTTAGGCG AAAAGCTGCC GATTTCACGG ATGCAGCGCG ATTTGTCCGA CTCTACCGTA
TTACGTAATA TCGGTGTTGG TCTGGCGCAA AGCATGATTG CTTTTGATGC ATGTTTAAAA
GGCGTCAGCA AACTTGAATT GAATGCGCAG CGTTTAAATG ATGACTTGGA CAGCGCCCAA
GAGGTTTTAG CAGAACCAAT TCAAACTGTT ATGCGCCGTT ACCGAGTTGA AAACCCATAT
GAGAAGCTAA AGGCATTAAC GCGTGGCAAC GCGATGACCC GTGAAGCAAT GCTGACTTTC
GTTGAAAGTG ATGAATTATC TGCGGTGAGC GATACTGATA AAGTGCGCCT ACGTGAAATG
ACGCCAGCAA CTTATGTGGG TAATGCGGCT GAACAAGCAC GCACAATTAA AGAGTGGATT
GCTAAGATTT AA
 
Protein sequence
MNLLTALSPI DGRYASKADS LRPYLSEFGL IKARVTVEIR WLQSLADNSA IGELAAFDTD 
TNAFLNAIVD NFSEADAQAI KDIEATTNHD VKAVEYFIKD KFRGQAALED SLEFIHFACT
SEDINNLSYA LMLKDSREIV VAKMQEVTDS IVDLAITYAD QPMLSRTHGQ TASPTTLGKE
MANVAYRLAR QIKQVGQVEL LGKINGAVGN YNAHYASYPD VDWQVHAEQF INDSLALTFN
PYTTQIEPHD YIAELFDAVK RFNTILIDFN RDIWQYISLG YFKQRLKEGE VGSSTMPHKV
NPIDFENSEG NLGVANAMLA HLGEKLPISR MQRDLSDSTV LRNIGVGLAQ SMIAFDACLK
GVSKLELNAQ RLNDDLDSAQ EVLAEPIQTV MRRYRVENPY EKLKALTRGN AMTREAMLTF
VESDELSAVS DTDKVRLREM TPATYVGNAA EQARTIKEWI AKI