| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1215 |
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| Symbol | rfbC |
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| ID | 3515172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1457952 |
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| End bp | 1458524 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637669903 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_264499 |
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| Protein GI | 71065772 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00252251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAACATCA TTGATACCAA GATACCAGAG CTATTAATCC TTGAGCCGCG CGTTTTTGAA
GATGACCGTG GCTGGTTTAT GGAAAGCTTT AATCACAAAA GCTTCACCAC TTTATTAAAC
GAACGTGGGT TTGAAGCACC AAACTTCGTC CAAGATAATC ATTCCAGCTC CCAAAAAGGA
GCACTGCGCG GCTTACATTA TCAGCTAAAT CCTTTTGCTC AAGCCAAGCT AGTGCGAGTG
GTACAAGGGC GGGCTTGGGA TGTGGCGGTA GATATTCGTC AGCACTCACC TACTTTTGGA
CAGTGGGTAG GTATAGAGCT TACAGCAACC AATCATCGTC AGTTTTGGAT ACCGGCAGGA
TTTGCACATG GTTTTATCGC ACTCGAAGAC AACACTCAGT TTTTGTATAA AACCACTAGC
TATTATCACA AAGAAAGTGA ACGGACTATT CTATGGAATG ATGATAGTTT AGATATTAAC
TGGCCAGTTG AAGGTTTAGA ACTCAAATTA ACTGAAAAAG ATCATCAAGG CGCTACCTTC
ACACAAGCTA TAGAGATAGG TGATACTTTT TAA
|
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| Protein sequence | MNIIDTKIPE LLILEPRVFE DDRGWFMESF NHKSFTTLLN ERGFEAPNFV QDNHSSSQKG
ALRGLHYQLN PFAQAKLVRV VQGRAWDVAV DIRQHSPTFG QWVGIELTAT NHRQFWIPAG
FAHGFIALED NTQFLYKTTS YYHKESERTI LWNDDSLDIN WPVEGLELKL TEKDHQGATF
TQAIEIGDTF
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