| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1213 |
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| Symbol | rfbD |
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| ID | 3514111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1456132 |
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| End bp | 1457037 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637669901 |
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| Product | putative dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_264497 |
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| Protein GI | 71065770 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases
[TIGR01214] dTDP-4-dehydrorhamnose reductase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00296174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAAAATTG TATTACTGGG TAAAAATGGT CAAGTTGGCT GGGAGTTACA GCGTGCTCTG
CAACCGTTAG GACACGTTAT TTCACTAGAT CGTCAAATGA ATGATAATGG GTTGTGTGGT
GATATAACCA ACTTTACCGC TATAGAACAG CTCTATGCTA CCATAGAGCC TGATGTAGTT
ATCAACGCAG CCGCTTATAC CACTGTAGAT AAAGCTGAAA GTGATTATAA ACAGGCTGAT
TTAATAAACC ATTTAGCTGT TAAACATTTA GCTGATATGT CTAAGCATTT TAATAGCTTG
CTGATTAATT ACTCTAGTGA TTATGTGTTT GATGGTACGC TAGACACGCC TTGGTCAGAA
ACAGATGATA GAATGCCCAT AAATAATTAT GGCAGGACTA AGTATGATGG AGAAATGGCT
TTAGAGAAAA GTGGTGCAAG ATTTATTAAC TTTCGCACCA GTTGGGTATA TGGCACCCAT
GGTAATAACT TTATTAAAAC CATGCTAAAG CTTGCTCAAA GCAAAGAAGA GCTTAACATC
ATCGCTGACC AAATTGGCGC GCCAACTGGA GCCGCTTTGA TTGCTGATAT TACTGCACAA
GCACTACGTT ACTATTTACT AAACAAACAA CCCAGTAGTC TACATGGACA CTATAACTTA
GCAGCAAAAG GTGAATGTTC ATGGTTTGAT TATGCTGAGT TTATCTTTGC GACCGCACAA
AAAAATATCG GTACAGAACT ACTCATAAAG CAGCTGAATC CTATTCCAAC ATCACAATAC
CCTACCCCTG CAAAACGTCC GCTCAACTCA CGTTTAAATA CTGAAAAACT ACAAACCCAC
TTCCAACTGC ACTTGCCACA TTGGCAACAA GGTGTTGCTC AAGTATTAGG AGAGCTATTG
CTATGA
|
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| Protein sequence | MKIVLLGKNG QVGWELQRAL QPLGHVISLD RQMNDNGLCG DITNFTAIEQ LYATIEPDVV
INAAAYTTVD KAESDYKQAD LINHLAVKHL ADMSKHFNSL LINYSSDYVF DGTLDTPWSE
TDDRMPINNY GRTKYDGEMA LEKSGARFIN FRTSWVYGTH GNNFIKTMLK LAQSKEELNI
IADQIGAPTG AALIADITAQ ALRYYLLNKQ PSSLHGHYNL AAKGECSWFD YAEFIFATAQ
KNIGTELLIK QLNPIPTSQY PTPAKRPLNS RLNTEKLQTH FQLHLPHWQQ GVAQVLGELL
L
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