| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1212 |
|---|
| Symbol | rffG |
|---|
| ID | 3514110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 1455014 |
|---|
| End bp | 1456096 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637669900 |
|---|
| Product | dTDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_264496 |
|---|
| Protein GI | 71065769 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
|---|
| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.809645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00336065 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTAG ATACTTCTAT GAACATACTG ATCACAGGCG GCGCAGGCTT TATCGGTTCA
GCCGTTATCC GTCATATTAT AACTAACACC ACAGATACCG TTTTAAATAT AGATAAGCTT
ACCTATGCTG GCAATCTAGA GTCGTTGGCT AGCGTATCAG ACAGCACACA CTATCAGTTT
TCCCAAACAG ATATTTGCGA TCAACCAGCT ATCGAAGCAC ACTTTACTGA CTTTCAACCA
GATATCGTGA TGCACTTAGC AGCAGAATCG CACGTTGACC GTTCTATCAC TGGTTCAGCT
GCCTTCATGC AAACCAATAT TATTGGCACG CATACCTTAT TAGAAGTGGC TAGACATTAC
TATGAAACGC TAAGCGGCGA TAAAAAAAGC AACTTCCGTT TTCATCATAT ATCTACTGAT
GAAGTCTATG GCGACTTAGA CAATGATGAT GATTTATTTA CTGAAACCAC CTCTTACGCG
CCAAGCTCCC CCTACTCAGC CAGCAAGGCC AGCTCAGACC ATCTCGTACG TGCTTGGGAT
CGAACTTACG GCTTACCAGT GGTAATTACC AATTGCTCTA ATAACTACGG TCCTTATCAT
TTCCCAGAAA AACTAATACC TTTAGTCATT CTAAACGCAT TAGCAGGTAA ACCTCTACCT
ATATACGGCA ATGGGCAACA GATTCGAGAT TGGTTATATG TTGAAGATCA TGCCCGTGCC
TTATACTTGG TCGCTACCGA AGGTAAAACA GGTGAAACTT ATAATATTGG TGGACACAAC
GAGCATACCA ATATTGAAGT CGTGCAAACG ATCTGTGCGT TATTAGAAGA ACTGGCACCG
AATAAACCGC ACGGTATTAC AAGTTATGCT GAGCTTATTA CCTATGTGAA AGACCGCCCT
GGACATGACT TGCGTTATGC CATTGACGCC AGTAAAATTC AGCAAGCATT AGGATGGACA
CCACAAGAAA CATTCAGTTC AGGTTTACGC CAAACTGTCT TATGGTATCT GAATAATTCA
GAGTGGGTTG AGCATGTGCA AAGTGGTGAG TATCAACACT GGGTAACTCA GCAGTATCAA
TAA
|
|---|
| Protein sequence | MSVDTSMNIL ITGGAGFIGS AVIRHIITNT TDTVLNIDKL TYAGNLESLA SVSDSTHYQF
SQTDICDQPA IEAHFTDFQP DIVMHLAAES HVDRSITGSA AFMQTNIIGT HTLLEVARHY
YETLSGDKKS NFRFHHISTD EVYGDLDNDD DLFTETTSYA PSSPYSASKA SSDHLVRAWD
RTYGLPVVIT NCSNNYGPYH FPEKLIPLVI LNALAGKPLP IYGNGQQIRD WLYVEDHARA
LYLVATEGKT GETYNIGGHN EHTNIEVVQT ICALLEELAP NKPHGITSYA ELITYVKDRP
GHDLRYAIDA SKIQQALGWT PQETFSSGLR QTVLWYLNNS EWVEHVQSGE YQHWVTQQYQ
|
|---|
| |