Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1204 |
Symbol | |
ID | 3514102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1446374 |
End bp | 1447351 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637669893 |
Product | lipid A biosynthesis acyltransferase |
Protein accession | YP_264489 |
Protein GI | 71065762 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00305247 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00931795 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATCCGT ATCATATTTT CAAAATCGTG CCATTATCTG TCTTGCAGAT GCTGGCACGT TTTGTTGCGT GGATAATCTT AAGAATGCCA AGCGCTAGTA TCATGCGCAC GGTCAAAATC AATATAGCGC TGATTGCGCC TAGGTTATCT GATTTGCAAA AACAAGCATT AACCAAAGAG ATTATCTACC ATCAATGCTT AACCAGCATT GAGTCAATCA AAAGCTGGGC CATGCCGCCT GAATGGAGTA TCGCTCAGAT TCGTGACGTC CATAATAAAG ACATTTTATT AGAAGGACTG GCGAGTCCTA ACGGCATGCT GGCAATCGTA CCGCATCTCG GTACATGGGA GATGATGAAC GCTTGGCTCA ATCAGTTTGG CTCACCAACC ATCATGTATA AGCCAGTTGA AGGTACGTTC GCTAATGAGT TTATCCTTCA AGGTCGTTCG CGTCTCAATG CCACTTTAGT TCCTACTGAT GGTAGCGGTG TAAAAGCGGT ATTCAAGACA CTCAAACAGG GTGGCTTTAG TATTGTGTTG CCAGACCATG TCCCTGACCT TTCAGGCGGT GTGGTTGTGC CCTTTTTTGG CATTGAAACG TTAACCAGCA CCCTTGCTTC AAAACTGGCG AGTAAAACCA AATGCGCACT GGTCGGATTG GCATGTATTC GCCGTGACGA CGGGCATGGT TTTGATATTT ATTGCTATAA ACTCGATGAC CCAGCGCTAT ATGACCGCCA TGCCGAAACA GCTGCTCAGG CACTTAACCA AGCCATGCAA CAGATGATTG AGGATAATTA TAGTCATTAT ATGTGGGGCT ATCGACGTTT TAAGCATATA CCAAATTTAG GCAATCCTTA CCAAAAGGAT AAAGCAGATT TAAAAGCTTT TATTCAAGCT CACCATTCTA TCGGTTCTGG TCGCTATAAT TATGATAACG ATGTCAGTGA TAACGCTAAG CTCGATAATG ATAAGTAA
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Protein sequence | MNPYHIFKIV PLSVLQMLAR FVAWIILRMP SASIMRTVKI NIALIAPRLS DLQKQALTKE IIYHQCLTSI ESIKSWAMPP EWSIAQIRDV HNKDILLEGL ASPNGMLAIV PHLGTWEMMN AWLNQFGSPT IMYKPVEGTF ANEFILQGRS RLNATLVPTD GSGVKAVFKT LKQGGFSIVL PDHVPDLSGG VVVPFFGIET LTSTLASKLA SKTKCALVGL ACIRRDDGHG FDIYCYKLDD PALYDRHAET AAQALNQAMQ QMIEDNYSHY MWGYRRFKHI PNLGNPYQKD KADLKAFIQA HHSIGSGRYN YDNDVSDNAK LDNDK
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