Gene Psyc_1204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1204 
Symbol 
ID3514102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1446374 
End bp1447351 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content43% 
IMG OID637669893 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_264489 
Protein GI71065762 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00305247 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00931795 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCCGT ATCATATTTT CAAAATCGTG CCATTATCTG TCTTGCAGAT GCTGGCACGT 
TTTGTTGCGT GGATAATCTT AAGAATGCCA AGCGCTAGTA TCATGCGCAC GGTCAAAATC
AATATAGCGC TGATTGCGCC TAGGTTATCT GATTTGCAAA AACAAGCATT AACCAAAGAG
ATTATCTACC ATCAATGCTT AACCAGCATT GAGTCAATCA AAAGCTGGGC CATGCCGCCT
GAATGGAGTA TCGCTCAGAT TCGTGACGTC CATAATAAAG ACATTTTATT AGAAGGACTG
GCGAGTCCTA ACGGCATGCT GGCAATCGTA CCGCATCTCG GTACATGGGA GATGATGAAC
GCTTGGCTCA ATCAGTTTGG CTCACCAACC ATCATGTATA AGCCAGTTGA AGGTACGTTC
GCTAATGAGT TTATCCTTCA AGGTCGTTCG CGTCTCAATG CCACTTTAGT TCCTACTGAT
GGTAGCGGTG TAAAAGCGGT ATTCAAGACA CTCAAACAGG GTGGCTTTAG TATTGTGTTG
CCAGACCATG TCCCTGACCT TTCAGGCGGT GTGGTTGTGC CCTTTTTTGG CATTGAAACG
TTAACCAGCA CCCTTGCTTC AAAACTGGCG AGTAAAACCA AATGCGCACT GGTCGGATTG
GCATGTATTC GCCGTGACGA CGGGCATGGT TTTGATATTT ATTGCTATAA ACTCGATGAC
CCAGCGCTAT ATGACCGCCA TGCCGAAACA GCTGCTCAGG CACTTAACCA AGCCATGCAA
CAGATGATTG AGGATAATTA TAGTCATTAT ATGTGGGGCT ATCGACGTTT TAAGCATATA
CCAAATTTAG GCAATCCTTA CCAAAAGGAT AAAGCAGATT TAAAAGCTTT TATTCAAGCT
CACCATTCTA TCGGTTCTGG TCGCTATAAT TATGATAACG ATGTCAGTGA TAACGCTAAG
CTCGATAATG ATAAGTAA
 
Protein sequence
MNPYHIFKIV PLSVLQMLAR FVAWIILRMP SASIMRTVKI NIALIAPRLS DLQKQALTKE 
IIYHQCLTSI ESIKSWAMPP EWSIAQIRDV HNKDILLEGL ASPNGMLAIV PHLGTWEMMN
AWLNQFGSPT IMYKPVEGTF ANEFILQGRS RLNATLVPTD GSGVKAVFKT LKQGGFSIVL
PDHVPDLSGG VVVPFFGIET LTSTLASKLA SKTKCALVGL ACIRRDDGHG FDIYCYKLDD
PALYDRHAET AAQALNQAMQ QMIEDNYSHY MWGYRRFKHI PNLGNPYQKD KADLKAFIQA
HHSIGSGRYN YDNDVSDNAK LDNDK