Gene Psyc_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1203 
SymbolaspS 
ID3514101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1444480 
End bp1446306 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content45% 
IMG OID637669892 
Productaspartyl-tRNA synthetase 
Protein accessionYP_264488 
Protein GI71065761 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0173] Aspartyl-tRNA synthetase 
TIGRFAM ID[TIGR00459] aspartyl-tRNA synthetase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.20939e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0042207 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGCATA GCGAATACCG AGACGAATAT TGCGGAGCCG TAACCGAGAG CTTAATTGAG 
CAAACCATTA GTGTCGTAGG CTGGGTACAT CGTCGTCGCG ATCACGGTGG CGTAATTTTC
TTAGACATGC GTGACCGCGC TGGTATCTTG CAGGTCGTTG TCGATCCTGA TACCCCAGAA
GCGTTTGCTA CTGCTGACGC GGTACGTCCT GAATATGTAC TAAAAATCAC AGGTCGTGTT
CGTCGCCGTT ATGAAGGCAC TGAAAACGCT AATATGACCA GTGGCCATAT CGAGCTATTG
GCCAAAGAAA TTGAAGTGCT GGCAAAGTCT GAAACTCCGC CGTTCCCATT GAATGATGAG
AAAAGTACGG TATCAGAAGA TTTGCGTCTC AAATATCGCT ATCTTGATAT GCGCCGTCCA
CAAATGCAAG ATCGCATGGT ATTCCGTGCT AAAGCCACCT CAGCGATTCG TCGTTATTTA
GATGATCATG GCTTTTTAGA CGTAGAAACC CCTATCTTGA CTCGTGCAAC GCCAGAAGGC
GCGCGTGATT ATCTGGTCCC TTCACGTACA CGTCCGGGTA ACTTCTTTGC CTTACCGCAG
TCGCCACAGC TGTTTAAACA GTTATTGATG GTGGCAGGTT TTGACCGCTA TTATCAAATC
GCTAAGTGCT TCCGTGATGA AGATTTACGT GCTGATCGTC AGCCTGAATT TACCCAAGTC
GATATTGAGA CTTCTTTCTT AAATGAAGAA GAAATCATGA ATATCAACGA AGGTCTGATT
AAGCATGTCT TTAAGACGAT GATGGACGTT GAGTTTGAGA AATTCCCACG TATGACTTAT
GCTGAAGCCA TGCGTGATTA TGCCTCAGAC AAGCCTGATT TACGTATTCC GCTTAAATTG
ATTGACGTTG CTGACTTGAT GAAAGACGTT GATTTTAAAG TCTTTGCCGG TCCTGCTAAC
GATCCTAAAG GTCGTGTTGC TGCGCTACGC ATACCAGGCG GCGCTTCATT AAGTCGTAAG
CAAATCGATG CTTATACCAA GTTCGTTGGT ATCTATGGTG CACGTGGTTT GGCTTATATT
AAAGTCAACG ATGCCAGCAA CATCAATAAC GGCGTGGATA AAGAATCTGG TCTACAATCT
CCTATCATTA AGAATATGAC TGATGATGTA TTGGTAAGCC TGATTGAGCG TACTGGTGCA
GAAAGCAATG ATATTATCTT CTTTGGTGCG GATAAAGCCA GTGTGGTGAA TGATGCCATC
GGTGCATTAC GTCAGAAGAT TGGTCTAGAT CTAGAGATGA CCACTTGTGA GTGGGCTCCA
CTTTGGGTAA CTGACTTTCC GATGTTTGAA GAAACTGAAG ATGGGCGCTG GACATCAATG
CATCATCCGT TTACTAAGCC AAAAGGTTCA GTTGAAGAAT TAAAAACCAA TCCTGAATCT
GCCCTTTCTA TCGCTTATGA CATGGTATTA AACGGTACTG AAGTTGGCGG TGGTAGTTTA
CGTATCAATA CGCTTGAAAT GCAAACGGCC GTGTTTGAAG CATTGGGTAT CGATGATCAG
GAAGCAGAAG ACAAATTTGG CTTCTTGCTT GACGCGTTAA AATTTGGCGC GCCGCCGCAT
GGTGGTTTGG CATTTGGTTT GGATCGCTTA ATCATGCTTA TGGTAGGCGC AAGCTCTATC
CGTGACGTGA TTGCTTTCCC AAAAACTAAA ACTGCTGAGT GTCCATTAAC ACAAGCACCG
GCTGAGGTGA ATACTAAGCA GCTACGTGAG CTTGGTATCC GTGTCCGTGA AAAAGTACAA
GCTGACACCA GCAAGCCTGC TGAATAA
 
Protein sequence
MTHSEYRDEY CGAVTESLIE QTISVVGWVH RRRDHGGVIF LDMRDRAGIL QVVVDPDTPE 
AFATADAVRP EYVLKITGRV RRRYEGTENA NMTSGHIELL AKEIEVLAKS ETPPFPLNDE
KSTVSEDLRL KYRYLDMRRP QMQDRMVFRA KATSAIRRYL DDHGFLDVET PILTRATPEG
ARDYLVPSRT RPGNFFALPQ SPQLFKQLLM VAGFDRYYQI AKCFRDEDLR ADRQPEFTQV
DIETSFLNEE EIMNINEGLI KHVFKTMMDV EFEKFPRMTY AEAMRDYASD KPDLRIPLKL
IDVADLMKDV DFKVFAGPAN DPKGRVAALR IPGGASLSRK QIDAYTKFVG IYGARGLAYI
KVNDASNINN GVDKESGLQS PIIKNMTDDV LVSLIERTGA ESNDIIFFGA DKASVVNDAI
GALRQKIGLD LEMTTCEWAP LWVTDFPMFE ETEDGRWTSM HHPFTKPKGS VEELKTNPES
ALSIAYDMVL NGTEVGGGSL RINTLEMQTA VFEALGIDDQ EAEDKFGFLL DALKFGAPPH
GGLAFGLDRL IMLMVGASSI RDVIAFPKTK TAECPLTQAP AEVNTKQLRE LGIRVREKVQ
ADTSKPAE