| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1202 |
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| Symbol | sohB |
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| ID | 3514100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1443136 |
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| End bp | 1444110 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637669891 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_264487 |
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| Protein GI | 71065760 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.184937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0260504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTCA ATCCTTCTAA AAACCCTGTC GAGTTAAGAG TTATACATCT GAATAAAAAC
CAAGAGCAGC GCCGTGAAGA TCTGATGGAA GCGACTCAAG GTAAAGCTGC CCTCAAACAA
TTCAAAAAAA CGCTGGCAAA GAAAGCAAAA CAAGCCCTAA AAACCAAAAA TAAGAAAAAA
AATAGCGATA GTAAGCAACA AATTTTTGTA CTCGACTTTG ATGGCGATAT CAAAGCAACT
GCTGTCAAAC ATCTACGTGA AGAGATTAGC ACGCTTATCA GCACGGCGAA TAAAGGCGAT
GAAGTGGTGG TGCGTCTGGA GTCGGGCGGC GGCGTAGTAC ACGGTTATGG TTTAGCGGCA
GCACAATTGG CTCGTTTAAA AGATGCCGGT TTGAAACTCA CCGTATGCGT CGATAAGGTC
GCAGCCAGTG GTGGCTATAT GATGGCCTGT GTAGCGGACA ATATTGTGGC GGCACCATTT
GCAATTATTG GCTCTATTGG TGTGGTATCA CAATTACCTA ACTTCCATAA ATGGCTCAAA
AATCATGATG TCGACTATGA GATGTTTACC GCTGGTGATT ATAAACGTAC CGTGACCGTA
TTCGGTGAAA ATGACGACAA AGATCGTGCC AAATATCAAG AAGAGCTAGA GCAAACGCAC
GAGTTATTTA AGCACTTCGT CAATCGTTAC CGCGGTATGC TTGATGTAGA TAAAGTCGCG
ACAGGCGAGC ATTGGTATGG TGAAGATGCG CTGCATTTGA ACTTGGTGGA TAAATTACAA
ACATCAGACA GTTATCTGTT AGAGCGTATG GAAAACAGCG AAGTGTATGC ATTGCATTCA
CGCCAAAAGC CAACACTTGC AGAAAAGCTA GGTCTGTCAC AAGCGGCAGA AGCAACACTC
AGTATGGCGA TTGATAAACT ACCAGATGCG CTAGCACGGT TTGACTTTAA TAGTCGTTTA
AATATTTTAA AATAG
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| Protein sequence | MLFNPSKNPV ELRVIHLNKN QEQRREDLME ATQGKAALKQ FKKTLAKKAK QALKTKNKKK
NSDSKQQIFV LDFDGDIKAT AVKHLREEIS TLISTANKGD EVVVRLESGG GVVHGYGLAA
AQLARLKDAG LKLTVCVDKV AASGGYMMAC VADNIVAAPF AIIGSIGVVS QLPNFHKWLK
NHDVDYEMFT AGDYKRTVTV FGENDDKDRA KYQEELEQTH ELFKHFVNRY RGMLDVDKVA
TGEHWYGEDA LHLNLVDKLQ TSDSYLLERM ENSEVYALHS RQKPTLAEKL GLSQAAEATL
SMAIDKLPDA LARFDFNSRL NILK
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