Gene Psyc_1201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1201 
Symbol 
ID3514099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1441922 
End bp1442791 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content45% 
IMG OID637669890 
Productshort chain dehydrogenase 
Protein accessionYP_264486 
Protein GI71065759 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0718298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0224844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAATA AATTACTGAG CCTAATAGCA AAAACGGCTA CCAAAAGTAA AAGTCAATTA 
TTTAGTGCCA TACAGCCAGC ACGTTATTTA AAAGGTTTGA ATAAACAGCA GGTTGGTCGC
GGTAAAACGA TTTTAATCAC TGGTGCCAGC TCAGGATTGG GCGAGGGAAT GGCGAGATTG
TTTGCTAAGC TCGGATATAA CCTTGCTATT TGTGCGCGTC GTATGGATCG TTTAGAGAGT
CTACAAACAG AGCTGATGGC ACAATATCCT GATATTCGTA TCGAGTATCG AGTGCTAGAT
GTTAGTGATT ATGATGCGAT TTTTGAAGTG TTTGACGCTT TCGCTGCTGA TTTCGGTCAT
ATCGATCGTG TCGTGGTCAA TGCGGGCATT GGTGAAAGTC GCCGTATTGG TAAAGGGCGT
TTCGATACCA ACCGCCGTAC GGTTGAGATC AATTTTATCT CGGCGCTTGC GCAGTGTGAA
GCAGCGATGA GTATCTTTCG TGAACAAGGT AGCGGTCATC TGGTCGTGAT ATCTAGTATG
TCAGCGATGC GCGGATTACC TAAGCATTTG ACTGCCTATG GTGCGAGTAA AGCAGGATTG
GCGCATCTGG CAGAAGGTAT CCGTGCTGAT ATGCTATTGA CCAAACTGCC GATCAAAGTC
TCTACTATTT ATCCAGGTTA TATCCGTACT GAAATCAATG AAAATGCTAA GCCTTTACCG
TTTGAAGTGG ATGCAGATAC CGGCACCAAG GCAATTGTGG CAGCGATTGA AGCTGGCGTG
GATGAAGCTT GTGTCCCAAG CTTACCCTGG TCAATTGTGG GTCAGGCAAT GAAGCATTTA
CCATTACAAG TGGTTAATAA AGTAAGTTAG
 
Protein sequence
MQNKLLSLIA KTATKSKSQL FSAIQPARYL KGLNKQQVGR GKTILITGAS SGLGEGMARL 
FAKLGYNLAI CARRMDRLES LQTELMAQYP DIRIEYRVLD VSDYDAIFEV FDAFAADFGH
IDRVVVNAGI GESRRIGKGR FDTNRRTVEI NFISALAQCE AAMSIFREQG SGHLVVISSM
SAMRGLPKHL TAYGASKAGL AHLAEGIRAD MLLTKLPIKV STIYPGYIRT EINENAKPLP
FEVDADTGTK AIVAAIEAGV DEACVPSLPW SIVGQAMKHL PLQVVNKVS