| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1097 |
|---|
| Symbol | |
|---|
| ID | 3514983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 1308510 |
|---|
| End bp | 1309697 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637669785 |
|---|
| Product | metal Ion (Mn2+/Fe2+) transporter, NRAMP family |
|---|
| Protein accession | YP_264382 |
|---|
| Protein GI | 71065655 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.156832 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACCC TAAAAAAACA CAATACCGCC ATTTTAGGCG CGGCCTTTCT GATGGCCACA
TCAGCAGTAG GGCCAGGGTT TTTGACCCAA ACCGCCACAT TCACCGAAAG CCTAATGGCA
AGTTTTGGCT TTGTTATCTT AATATCTATT ATTATGGACA TTGGGGTCCA GCTTAACGTT
TGGCGAGTAG TCGCTGTCTC CAAAAAACGT GCACAGGAAA TCGCCAACTT GGTGTTCCCT
GGTGTCGGTT ACTTGCTCGC TTTTTTGATT ATTGCGGGTG GTCTTGCTTT CAATATTGGT
AATATTGGCG GTGCAGGACT TGGTATGCAG TCCATGTTTA ATATGTCGCC TATCACAGGT
GCGCTGATTA GTGGTGTGAT TGCAGTCGCC ATATTTTTGG GCCGAGAAAC GGGTCCTATG
ATGGATAAAT TCGCTCAGTT GATGGGCTTT ATCCTTATTG TATTGGTCAT TTATGTGGTC
TTTAAATCTG ACCCACCATT AGCAGAAGCC GTCAGTAAAA CCATCATGCC TGACAAGATT
GATGCAGTCG CTATCGTGAC GCTAGTAGGT GGTACGGTTG GCGGTTATAT TACCTTCTCA
GGTGCGCATC GCTTATTAGA AGCAGGTGTC AGCGGAGAAG AGAACTTAAG CTCAGTGACC
AGAAGCTCTG TCTCTGGTAT TTTAATTGCC TCTGTGATTC GCGTGTTTTT ATTCCTTGCG
GTATTAGGTG TGGTGTCTCA AGGCTTTGCA TTGGATCCCG CCAACCCAGC CATGTCGCCT
TTTGAATATA TTTTAGGAAA TGCAGGTAAA GTTATCTTTG GTATGGTGAT TTGGGCTGCT
TCTGTGACCT CGGTTATTGG TGCTGCTTAT ACCTCTGTGT CTTTTATGAC CAACTTTCAT
CCATTCATTG AAAAGCACAA ACGCTACTTT ATTATTGGTT TCATCGTTAT CTCAACAATG
GTATTTGCCA CTATCGGTAA GCCTGCACAA GTACTGGTAT TGGTCGGTAC GTTAAATGGT
TTGGTTTTAC CTATCGCTAT GGTCATTATT CTGATTGCCG CCTACAGAAA AAATATCGTT
GGCAATTATA AGCACCCTAT TTGGATTGCG GTATTTGGTT GGTTAATCGC CATCGTCATG
AGTATTTTGA GCGTCATGAC CATTGCTAAA TACCTTGGCA TGAATTAA
|
|---|
| Protein sequence | MSTLKKHNTA ILGAAFLMAT SAVGPGFLTQ TATFTESLMA SFGFVILISI IMDIGVQLNV
WRVVAVSKKR AQEIANLVFP GVGYLLAFLI IAGGLAFNIG NIGGAGLGMQ SMFNMSPITG
ALISGVIAVA IFLGRETGPM MDKFAQLMGF ILIVLVIYVV FKSDPPLAEA VSKTIMPDKI
DAVAIVTLVG GTVGGYITFS GAHRLLEAGV SGEENLSSVT RSSVSGILIA SVIRVFLFLA
VLGVVSQGFA LDPANPAMSP FEYILGNAGK VIFGMVIWAA SVTSVIGAAY TSVSFMTNFH
PFIEKHKRYF IIGFIVISTM VFATIGKPAQ VLVLVGTLNG LVLPIAMVII LIAAYRKNIV
GNYKHPIWIA VFGWLIAIVM SILSVMTIAK YLGMN
|
|---|
| |