Gene Psyc_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1092 
Symbol 
ID3514978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1302357 
End bp1303616 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content36% 
IMG OID637669780 
Producthypothetical protein 
Protein accessionYP_264377 
Protein GI71065650 
COG category[S] Function unknown 
COG ID[COG3174] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.160606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0424364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCA TAATTGTTAA TACATTTACG ATTGAACCTG TCCAAAATTT AATTACTGCA 
ACTACTGCAG CACTAGGTTG TGGACTACTC ATTGGTCTAG AAAGAGAGCG TAGCAAACAA
CGTGGAAATC AACACAGCTT TGCAGGTATT AGATCTTTTG CAATTTGCTC TCTATTAGGG
GCAATTTGTT TTTCTTTCGG TTTTTTTATA GGACTCATAG GGGCATTGAT AGTAGGTAGT
ATAAGTATCA TCTCTATTAA TAAACAAATT GAAGATCCAG GTGTAACAAC TGAACTTGCT
TTTATACTCA CCTATTTTAT AGGTGGACTA TGTTTATGGC ATATTTCTTA TGCAGCTGCA
CTTACAGTAG TCCTTACCTT CCTTCTAATG ACAAAGCATT CAATGCATGG AGTAGCGACT
AAATGGATTA CTGAGCTTGA ATTCAAAGAT GGTATCTTTT TACTTGCTTT ACTTTTAATT
GCACTTCCTT TAACCCCCAA TAGGGCTCTT TGGGGTTCAG TACTAAATCC TTATATTATT
TTAAAATTAT TGACATTGGT TTTAGCAATT CAAGCACTAG CACATATGGC AAAGAGGCTT
CTATCATCAC GCCACGCCAT GTTTTTATCT GCTTTAGCAT CAGGATTTGT ATCCAGTACA
GCCACGATTG CAAGCCTTGG AATAGAAGTT CGTCATGGTC GTGCAGATGC AAAAGAAAAT
GCTGGAGCTG CCCTTATATC CTGTGTCGCA ACATTGGTAC AACTTCTTAT TATTGTTGCA
GGTGTAAGTT TTACTTGGCT TAAAATTTTA TTATTCCCAT CTATTATTGC AATAATAATT
TTAATTATTC CTGGAATATG GTTGATGAGA AAAACTCGAT CCGGAGAGAA AGTTAAGTTA
ACTGATACAC CCATGTTTAG TTTAAAAGAG GCAGGTATCA TTGTAGTTAC ACTTACTATT
ATTCAAGTAA TTGTTTATGG TTTAAGTTTA TGGCTGGGTG ACGCTGGTCT TATTGCAGGA
ACCGTACTTA CTTCTATCTT TGAGATACAT GCAGCAATGG CTGCCGTAGT AATGCAAGGG
AACCCAACTA ACCATATTTT ATTGCTCGCC TTATTATTAG GTTTAGCTAC ACATGCAATT
TCTAAATCAA TTAATGCGGC AATTACTGGT GGTTTTCAAT ACGCACTTGC TTTTGTTCCA
ACCCAAATTA TTCACATGAC TGTTTTAATT ATCTTGATAT ATACTATGAC GAATAATTAA
 
Protein sequence
MNFIIVNTFT IEPVQNLITA TTAALGCGLL IGLERERSKQ RGNQHSFAGI RSFAICSLLG 
AICFSFGFFI GLIGALIVGS ISIISINKQI EDPGVTTELA FILTYFIGGL CLWHISYAAA
LTVVLTFLLM TKHSMHGVAT KWITELEFKD GIFLLALLLI ALPLTPNRAL WGSVLNPYII
LKLLTLVLAI QALAHMAKRL LSSRHAMFLS ALASGFVSST ATIASLGIEV RHGRADAKEN
AGAALISCVA TLVQLLIIVA GVSFTWLKIL LFPSIIAIII LIIPGIWLMR KTRSGEKVKL
TDTPMFSLKE AGIIVVTLTI IQVIVYGLSL WLGDAGLIAG TVLTSIFEIH AAMAAVVMQG
NPTNHILLLA LLLGLATHAI SKSINAAITG GFQYALAFVP TQIIHMTVLI ILIYTMTNN