| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1079 |
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| Symbol | |
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| ID | 3514965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1287431 |
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| End bp | 1288807 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637669768 |
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| Product | major facilitator superfamily multi-drug efflux pump |
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| Protein accession | YP_264365 |
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| Protein GI | 71065638 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0013428 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGCAC TGACTCCAAC GCAAGATAAA TACCTACCTT ATGTACTGGC GGTAGCGTTA
TTTATGCAAA TTTTAGACGC TACTATTCTA AATACCTCCC TACCACAGAT GGCACAAGCA
TTGGGCGAAT CACCACTACA AATGCAATGG GCGGTTATCA GCTACGCGCT TACTTTGGCG
ATTTTTATTC CTATTAGCGG ATTTTTAGCC GATAAATATG GCACACGCCG CGTGTTCTTG
TCCGCCATTA TCATATTTTG TATCGGCTCG CTATTGTGTG CCGCTTCTCC GACCTTGGAT
TTTTTGATCA GTTCACGTAT CGTACAAGGT ATCGGCGGCG CGATGATGAC ACCGGTTGCA
CGCTTGATAT TGGTCAAGTC TTATCCGCGC AATAAGCTAT TAACGGTGAT GAACTTTGCG
GTCATCCCTG CTTTGGTTGC ACCATTGGTC GGACCAGTAT TGGGTGGTTA TATCGTACAG
TACACCAGCT GGCACTGGAT ATTTTTAATC AATATCCCGA TGGGTATTTT TGGTTTTATC
ATGGGCAAAA AACTGGTGCC AGCATTGTTT GAGGACTCCA AGCGTCTAGA TTGGACAGGG
TTTTTATTGT TTGCCGCTGC TGCGTGTGGT TTTACTCTGG CAGTAGAATT TGGCACACAA
GTCGGGCGTG AATTTTATGG AATGATGCTT GGATTGCTGG CAAGTCTATT GCTCGGCGCT
TATATTTGGC ACGCAAAACG CCGCGCAACA CCGCTATTTC CATTGAGTTT GTTTGATATA
CGTACCTTTC GTATCGGCAT CACAGGCAAT TTATTTACCC GATTGGGCAT TAGCGCTGTA
CCATTTTTAC TTCCACTACT GCTGCAGGTG GTGTTCGAGT ACTCTCCATC GCAAGCGGGC
TGGCTACTCG CTCCTATTGC TGTAGGGGCT ATCGGCATCA AGCCTTGGGT GAGTAACATT
ATTCAGCGTT ATAGCTATCG GACGGTATTA GTCTACAACA CGACTTTGAT AGGCATACTG
ATTATCATCT TGGCGCAGTT TAATGATGCG GCACAGTGGA TGTGGTTTAT CCCTATTTTG
ACAGTGATGG GCGCGTGTAA CTCTATGCAG TTCAGTGCGA TGAACACCAT CACCATTGGC
GACCTGCACG GCGCACAAAC CAGTAGCGGC AATAGTTTGA TGGCCGTCAA CCAACAATTG
GCAATCAGCT TTGGCATTGC CTTTGGTGCT GCACTGCTCA ATCTACTACG TGAGCGCCTA
CAGATGGATA CATTGACCGC CTTTCAAACC ACCTATTGGA TATTGGGTCT GTTTACCATT
CTCTCAGGAT TGCATTTCTT ACGCTTAAAA CCCGAGGATG GTCGCGGCTT ATATTGA
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| Protein sequence | MVALTPTQDK YLPYVLAVAL FMQILDATIL NTSLPQMAQA LGESPLQMQW AVISYALTLA
IFIPISGFLA DKYGTRRVFL SAIIIFCIGS LLCAASPTLD FLISSRIVQG IGGAMMTPVA
RLILVKSYPR NKLLTVMNFA VIPALVAPLV GPVLGGYIVQ YTSWHWIFLI NIPMGIFGFI
MGKKLVPALF EDSKRLDWTG FLLFAAAACG FTLAVEFGTQ VGREFYGMML GLLASLLLGA
YIWHAKRRAT PLFPLSLFDI RTFRIGITGN LFTRLGISAV PFLLPLLLQV VFEYSPSQAG
WLLAPIAVGA IGIKPWVSNI IQRYSYRTVL VYNTTLIGIL IIILAQFNDA AQWMWFIPIL
TVMGACNSMQ FSAMNTITIG DLHGAQTSSG NSLMAVNQQL AISFGIAFGA ALLNLLRERL
QMDTLTAFQT TYWILGLFTI LSGLHFLRLK PEDGRGLY
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