Gene Psyc_1055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1055 
SymboldnaX 
ID3514941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1252737 
End bp1254632 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content45% 
IMG OID637669744 
ProductDNA polymerase III, gamma subunit / DNA polymerase III, tau subunit 
Protein accessionYP_264341 
Protein GI71065614 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0820336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.461674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC AATATCAAGT TTTAGCCCGC AAATACCGAC CCAAAAACTT TCACGAGTTG 
ATCGGGCAAA CGCATGTCTC ACAGGCACTG ATTAATGCGA TTGATTATAA TCGTCTACAT
CATGCTTATC TATTTACAGG TACGCGCGGA GTCGGTAAGA CGACCATTGC CCGTATTTTG
TCTAAGTGTT TAAACTGTGA TACGGGTATT ACCAGTACCC CATGCGGCGT GTGTGATAAT
TGCGTAGCGA TTGATCAAGG GCGTTTTATT GATCTGATTG AGATTGATGC GGCTTCTCGC
ACCAAAGTTG AAGACACGCG CGAGCTACTT GATAATGTGC CGTATGCGCC AAGCCAAGGT
CGCTATAAAG TGTACCTGAT TGATGAGGTG CATATGCTGT CGACACACAG TTTTAATGCG
CTTCTTAAGA CTTTGGAAGA GCCGCCTGAG CATGTCAAGT TCCTATTAGC AACTACTGAT
CCTCAAAAGC TGCCGATTAC TATTATCTCT CGCTGTTTAC AGTTTGTATT GCGTCCTTTA
TCGCAGAGTT TACTCAGTGA GCATTTAGCC AATGTCTTAA CCCAAGAACA AGTAGGCTAT
ACGCAGCCTG CACTTTGGCA ATTGGCCAGT GCGGCAAAAG GTTCGGTACG TGATGCCTTA
TCGTTGACTG ACCAAGCCAT TGCTTTTGGT CAAGGTGCGC TTGATGATGT GACCGTTAAT
TCGATGCTTG GCTTGATTGA TGCGGCCGAT TTAGTCAGCT TAATTACAGA TATTTATCAT
CATGATAAAC CTGCTGTTGC TGCTCATATT GAGCAGATGC GTGCGCAAAT GGTCGATGCA
TCTAGTATGT TTGATGGACT CGCTGAGCTA TTGCATCAGT TGGCATTGTG TCAGCTGCTG
CCCGAAGTCG CTCTCAACGT AAATGAAGCG CAAGCACAGC ATATTAATCA GCTTGCCCAG
CATATGAGCC CTGACGTATT ACAGCTTTAT TATGAAATCG TGGTACAAGC ACGTGAAGGC
GTCAAGCTTG CCAGTACGCC TATGCAAGCG CTTGAGATGT GTATTTTACG TCTTTTGGCT
TTTCGTCCTT TGCCGGTTGA TGAGATACTA GTCAAGGTAC CTGATAGTAC GGTAACGGCT
ATAGAGCATT ATAGTCCCAC CATCTCTAGC ACTACATCAG CCACCACTAC TGAGCCAGTG
CCATCGTCAT TAGAATCACA AGCCCAAGCC GATAATATCA TTTATGACAA TGCTGATATC
AGTGTCAGTG AGAAAAACAG GGTTGGGGCT GATAATATTG TTAATCAAAA TGAGCAATAT
CACTCAAATG ACCCTGCTAG TGAATCAAGC CAGTACAATG ATTATAGCGT TCATAACAGT
TTAGAGTTAT CTAGCAATCA GCTTGAACCC GTTGTTGAAC CCGTTATAAA TGATTCTCAA
TTATTTAGTC AGCCTGAAGA CCCTCGTGCG CTTCTACGTT GTCCGCCGCA AGAATTGATA
GGTGAGTGGA CAGCAGAAAA ATGGGACTAT TGGCTGCAAA CTGCTCGTGA AGCCGGTAGT
TTAGCTCAAG ATGAATTGGC GCTTGCGCGT CAGGGTATGA TGACAGGCAG TTGTAATGCC
GAAGCCGTCT TTGTCACAGC AGTCGATAGT AAGCATTTGC AGGCAACGTT TGAGCAGCTA
GCGACAAAGA TGCAGCTACA GTTTCCTGCT GCTGCCATCA GTTTACGAAT TGATAGCAGT
ATTATGCAAG CCGATGATAA AACCCCAGAG CGTCGTCAAC AAAAACGTCT CGTCCAAGCC
AAAACAGTAG CAGAGTCAAG ATTGTTTAAT ACACCAGTGA TGCAATATTT AACCGAGCGC
GGCGAAGGCA AAATGGGCAA AGTTCAGTTA TATTAA
 
Protein sequence
MTQQYQVLAR KYRPKNFHEL IGQTHVSQAL INAIDYNRLH HAYLFTGTRG VGKTTIARIL 
SKCLNCDTGI TSTPCGVCDN CVAIDQGRFI DLIEIDAASR TKVEDTRELL DNVPYAPSQG
RYKVYLIDEV HMLSTHSFNA LLKTLEEPPE HVKFLLATTD PQKLPITIIS RCLQFVLRPL
SQSLLSEHLA NVLTQEQVGY TQPALWQLAS AAKGSVRDAL SLTDQAIAFG QGALDDVTVN
SMLGLIDAAD LVSLITDIYH HDKPAVAAHI EQMRAQMVDA SSMFDGLAEL LHQLALCQLL
PEVALNVNEA QAQHINQLAQ HMSPDVLQLY YEIVVQAREG VKLASTPMQA LEMCILRLLA
FRPLPVDEIL VKVPDSTVTA IEHYSPTISS TTSATTTEPV PSSLESQAQA DNIIYDNADI
SVSEKNRVGA DNIVNQNEQY HSNDPASESS QYNDYSVHNS LELSSNQLEP VVEPVINDSQ
LFSQPEDPRA LLRCPPQELI GEWTAEKWDY WLQTAREAGS LAQDELALAR QGMMTGSCNA
EAVFVTAVDS KHLQATFEQL ATKMQLQFPA AAISLRIDSS IMQADDKTPE RRQQKRLVQA
KTVAESRLFN TPVMQYLTER GEGKMGKVQL Y