| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1053 |
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| Symbol | prfA |
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| ID | 3514939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1249626 |
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| End bp | 1250714 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637669742 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_264339 |
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| Protein GI | 71065612 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.520226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.650406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGAAT CCTTACGCCT GCGTTTAGAC CAGATGGTAG ACCGTTATGA AGAGGTCACT
GCCTTATTAT CAGACCCGAG TGTCATCAAT GATAACAATA AATTCCGTGA GCTGTCCGTT
GAGCATAGTG ACTTGATGGA TATCACCACT TTATGGCAGA ACTATGTTGG TGCAGAAACG
GATCAGGCTG ATGCAGAAGC TATGCTAAAA GAAGCTTCAG ATCCTGACAT GAAAGAGATG
ATGCAAGAAG AGATTGACAG TGCTCGCGAT ACTATTGTAG AGATGGAAGA AGCACTTAAT
GTCATGATGC TGCCAAAAGA CCCTAATGAT AAAGTACCAG CATTTTTGGA GATTCGTGCA
GGGACAGGTG GTGATGAAGC GGCAATTTTC TCTGGTGATT TGTTCCGTAT GTATCAAAAG
TATGCGCAAG CTCAAGGCTG GACCTTAGAG GTTTTGTCAG CCAATGAAGG TGAACATGGG
GGTTACAAAG AAATCATTAC CCGTGTGTCT GGTAATAGCG TCTATGGTCG CCTAAAGTTT
GAGTCTGGCG TGCATCGTGT GCAGCGTGTC CCAGATACTG AAAGCCAAGG TCGCGTGCAT
ACGTCAGCCT GTACCGTCGC TGTTATGCCT GAAGTTGAGA TTGATGACAC GGTTAATTTG
AACCCAGCCG ACATTCGTTT TGATACGTTC CGCTCAAGCG GTGCCGGTGG TCAGCACGTG
AATACCACTG ACTCAGCCGT ACGTTTGACG CACATTCCAA CCGGTACCGT GGTAGAGTGT
CAACAAGAAC GCAGTCAGCA TAAAAACCGT GCGCAAGCCA TGAAAATGCT GATTTCTAAA
ATTCAGCAAG TCAAAGTTCA AGCACAGGTA GATGCAGCTG ATACGATACG TCGCGACTTG
GTTGGTAGCG GTGATCGCTC AGAGCGTATC CGCACCTATA ATTTCCCGCA AGGCCGTATG
ACTGATCATC GTATTAACCT GACCTTATAT AAGCTTGATT CGATTATGGA AGGTGACTTG
GATGAAATCC TTGATGCGTT GTTACGTGAG CACCAAGCGG ACTTGATGGC AAGTGTTGGT
GGTGCTTAA
|
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| Protein sequence | MKESLRLRLD QMVDRYEEVT ALLSDPSVIN DNNKFRELSV EHSDLMDITT LWQNYVGAET
DQADAEAMLK EASDPDMKEM MQEEIDSARD TIVEMEEALN VMMLPKDPND KVPAFLEIRA
GTGGDEAAIF SGDLFRMYQK YAQAQGWTLE VLSANEGEHG GYKEIITRVS GNSVYGRLKF
ESGVHRVQRV PDTESQGRVH TSACTVAVMP EVEIDDTVNL NPADIRFDTF RSSGAGGQHV
NTTDSAVRLT HIPTGTVVEC QQERSQHKNR AQAMKMLISK IQQVKVQAQV DAADTIRRDL
VGSGDRSERI RTYNFPQGRM TDHRINLTLY KLDSIMEGDL DEILDALLRE HQADLMASVG
GA
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