Gene Psyc_1051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1051 
Symbol 
ID3514937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1246757 
End bp1247521 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content43% 
IMG OID637669740 
ProductDMT superfamily efflux pump 
Protein accessionYP_264337 
Protein GI71065610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.226473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.464817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCTC AGGCGTACTA CTTACGACAT CGAGCATCAA AGATTGGTCA ACCCTTTGAT 
AACAGACTAT TAAGCGAAAA AGGTAGTTGG CTGAGCAGCA TAAGCTTAGT GATTTATGCG
CTGTGCTTCT CAGTTGCTTA TGTCGAGCTT GAGACTGGCA CTGGGGCGCT GATTTTATTT
TCAGCGGTTC AGCTCACCAT GATTGGTTGG GGTATTTATA AAAAGGAGAC ATTGAGTCAT
TTGCAATGGA TTGCCTTTGT TGTCGCTATC GCAGGGTTTG TCTATTTGAT GCTACCGTCG
GCGGCGATGC CTTCATTACT CGCTGCCATG CTAATGGCAA TCAGCGGTGT AGCATGGGGT
ATCTATAGCA TACGTGGCAA AATCTGTCTC TCACCGCTGC GAGCCACAGG CTTTAATTTC
ATCAGAAGTC TGGTAGCGAT ACCGATATTA TTATTCACTG GTTTTATATA TCAAAACATT
ATGGATGTGC AACTCATTCA TTTAGACAGT ATCACCATGG AGGGGATATG GTTGGCGTGT
GCATCAGGGG CAGTTACCTC TGGTATAGGC TACAGCATCT GGTATATGGC AATGCCTTTA
TTAAAAAATA CGCAGGCGGC CGTTATACAG CTTTGTGTAC CTGTGCTTGC AGCATTACTG
GGCGTAGTGA TTTTGTCCGA ACCAATGACT TTAACTTTTA TAGTAGTAAG TGCTGTCATT
TTGAGCTCAG TATTGGTCTT TATTTTAAAT AAACAGCCAT ATTAA
 
Protein sequence
MASQAYYLRH RASKIGQPFD NRLLSEKGSW LSSISLVIYA LCFSVAYVEL ETGTGALILF 
SAVQLTMIGW GIYKKETLSH LQWIAFVVAI AGFVYLMLPS AAMPSLLAAM LMAISGVAWG
IYSIRGKICL SPLRATGFNF IRSLVAIPIL LFTGFIYQNI MDVQLIHLDS ITMEGIWLAC
ASGAVTSGIG YSIWYMAMPL LKNTQAAVIQ LCVPVLAALL GVVILSEPMT LTFIVVSAVI
LSSVLVFILN KQPY