Gene Psyc_1042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1042 
Symbol 
ID3515042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1233479 
End bp1234804 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content43% 
IMG OID637669732 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_264329 
Protein GI71065602 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.766681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC AAAACAGTAT TGCTAAATTA GTAAGTAGCA AATTAGTCAG TAGCAATGGA 
TTACAGTATA CTGGCTATTT AGCTGTTGCC AAGACACGCG CCAAAGTACT AAAAGCCTTC
GCTTATATTA TTCCGATTAG AAGACCGATG TTATTCGTCG GCGAGAGCTC TTGTGATGAG
CTATGCGATA TGCTCATTAA TGAAGGTAGC ACCAATGTCT TTATCGTGAC TGATGGAGTG
CTAAATAAGC TCGGCATACC AGCCAAAGTC ACTGATTATC TAGATAGTAA AAATATCAGC
TATAAAGTCT ATGACGGTAT TACACCAGAC CCTACTTTTA AAGTGGTTGA AGAAGGACTA
CGCATATCCG TTGATGCTAA ATGCGATTCA ATTATTGCAA TCGGCGGTGG GTCGGTCATT
GATGCAGCTA AAATGATAGC CATGTCACAA GGCAACAATT GCAAGCCGCA GCAGCTTATC
GGCATTCTTA AAGCAAGAAA GCCTTCTGTA CCGTTGTACT GTGTGCCTAC AACTGCTGGT
ACTGGTTCGG AAGCGACACT TGGTGCGGTT GTATCAGACG ATAAAACTCA TCAAAAAGCC
CTATCTATCG ATCCAAGAAT GGTGCCATTA GCAGCGGCTA TTGACCCAGT TATCATGAAA
GGTATGCCGG CTCATATCAC AGCGGATACG GGTATCGATG TGTTGACACA TGCCCTAGAA
GCTTGGATGA GTGCCAATGC TAGCGTAGAG ACTGATTATT ATGCTGCCTC TGCGGTTAAG
TCAGTTATGC AGAATCTGCC AATAGTATAC GAAGACGGCG GCAATCTCAA AGCCAGAGAA
GCAATGGGTA TTGCGGCTCA CTACGGCGGG ATTGCCTTTA ATAAAGCAGG CCTTGGTTAT
GTCCATGCCA TCGCTCATCA GCTAGGGGCG TATTATAGTA TTCCTCATGG TCGCGCCAAT
GCCATCGTGT TACCTTATGT ACTTGATGTC AATCGTCAAG CGAGCAAAAA GAGATTGGCT
GAGCTGGCTA GAAAAACGGG CATGGTAAAA TCTGGTCAAG CTAGCAGCAG TGATAGCGAT
ATCGCCGATT ATCTCATCGC CCAAGTACGT GAATTGATTG CAACCTTAAA CATCGATCCA
ACAGTTAAAG GTATGAAAGC CAGTGATTTT GATAGTATTG CTAAAGCAGC GGCTAAAGAA
GTCAGTGATA CTTATGCGGT ACCGACTTAT CTGTCAGCGT CTGAAATAAA AGATATCTTA
TTGAAGATTA AGCAGGCAAG TGAAGATGCT GCTGGTACTG ACGCTAAAAA TGATAAAGTT
GCATAG
 
Protein sequence
MKKQNSIAKL VSSKLVSSNG LQYTGYLAVA KTRAKVLKAF AYIIPIRRPM LFVGESSCDE 
LCDMLINEGS TNVFIVTDGV LNKLGIPAKV TDYLDSKNIS YKVYDGITPD PTFKVVEEGL
RISVDAKCDS IIAIGGGSVI DAAKMIAMSQ GNNCKPQQLI GILKARKPSV PLYCVPTTAG
TGSEATLGAV VSDDKTHQKA LSIDPRMVPL AAAIDPVIMK GMPAHITADT GIDVLTHALE
AWMSANASVE TDYYAASAVK SVMQNLPIVY EDGGNLKARE AMGIAAHYGG IAFNKAGLGY
VHAIAHQLGA YYSIPHGRAN AIVLPYVLDV NRQASKKRLA ELARKTGMVK SGQASSSDSD
IADYLIAQVR ELIATLNIDP TVKGMKASDF DSIAKAAAKE VSDTYAVPTY LSASEIKDIL
LKIKQASEDA AGTDAKNDKV A