Gene Psyc_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0934 
SymbolftsY 
ID3514896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1120374 
End bp1121810 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content45% 
IMG OID637669623 
Productsignal recognition particle-docking protein FtsY 
Protein accessionYP_264221 
Protein GI71065494 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0552] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000272201 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACC TCAATAATAG CAATCGTGTG GTCATTAACC TTGACAGCGG ACTTGATGAA 
TTAGATGACG ATGATATTAC CTTACCCAGT CTGCCGGTGC AATCTGTACC CATTATCGAT
GCGCCTGAAA AAAGTGATGT CAGTGAAGGT AATGAGTCAG CAACCGTAAC AGCAACTGTC
AATAAGCAAG TATCAAGCAC CGATGCAGCA GAGAGTATTG CCCTAGGCGC GCCTATCATT
ATTAGGCAAA AGCAGAGTAA TACAGGGAAT ACCTCGGAGA GCTTTTCAAA TACCAATGAA
ACAGCGGCTG CGACACCAGC TGTCTCTGCG TCAAAAATCC CCACTATGCC CTTACAAGCA
CAATTAGGGG ATTTTCCAAG CGTGACTTCT AGCCGTGCAA GTACCATTAA TAGTAGCAAT
CAAGTGTCTT CTGAGCCACA GCAAACGGTG GCAGTAGAGT CGCAAGAAAC TAAAGCGTTG
CAAGAGGAGC AAGAAAATAG CAAAAAAGGC AGTTGGTTTA ACCGGATGAA AACCGGCTTG
AGTAAATCGC GCAAAAATTT AGCTGAAGGG ATGGTCGGTA TCCTTATTGG TGGCAAAGAG
ATTGATGATG AGCTGTTAGA AGAAGTCGAA GACCAGCTAC TAGTGGCTGA TATCGGTGTC
AACGCGACCA ATCGTATTAT TAAAAGTCTT ACTGAGCAGA CAGATCGTGG CGATTTAATC
TATGCACATT CATTGTACAA GGCACTGCAA ACTGAATTGG TCGATATCTT AACGCCAAAA
GTTGCACCAC TCATCATTGA TACCAGTAAA CAGCCTTTTG TTATCTTGGT TGTAGGCGTG
AATGGCGTGG GCAAAACCAC TACTATCGGC AAGCTTGCCA AACGTCTGCA AGGCGAGGGC
AAGTCGGTCA TGCTGGCAGC TGGTGATACG TTCCGCGCCG CCGCCACTGA ACAGCTACAA
ATTTGGGGCG AACGCAATAA TATTCCAGTC GTGGCGCAAG GTCATGGCTC TGATAGTGCT
TCTGTTATAT TTGATGCCAT GCAATCTGCT AAAGCAAAAA ACATTGATGT ATTAATTGCT
GATACCGCTG GGCGCTTACA GAATAAAACT CACCTGATGG CAGAGCTCGA AAAAGTAGTG
CGCGTGATGC GTAAAGCAGA CTCAAGTGCG CCTCATGAGG GTATGATTGT GCTTGATGCT
GGCACGGGTC AAAATGCAAT TAATCAAGTT GAGTTATTCA ATAAAGTGGT GCCATTAACC
GGTATTACGA TTACCAAATT AGACGGTACT GCTAAAGGCG GCGTGGTCTT TAATATTGCC
GAAACAACGG ATGTGCCTAT TCGTTATATT GGTGTAGGCG AGTCGATTGA TGATTTGCGT
GCTTTTAGTC CCAAACAATT TGTCGCCGCA TTGTTTGAGA CCGATGATAA AGAATAG
 
Protein sequence
MNNLNNSNRV VINLDSGLDE LDDDDITLPS LPVQSVPIID APEKSDVSEG NESATVTATV 
NKQVSSTDAA ESIALGAPII IRQKQSNTGN TSESFSNTNE TAAATPAVSA SKIPTMPLQA
QLGDFPSVTS SRASTINSSN QVSSEPQQTV AVESQETKAL QEEQENSKKG SWFNRMKTGL
SKSRKNLAEG MVGILIGGKE IDDELLEEVE DQLLVADIGV NATNRIIKSL TEQTDRGDLI
YAHSLYKALQ TELVDILTPK VAPLIIDTSK QPFVILVVGV NGVGKTTTIG KLAKRLQGEG
KSVMLAAGDT FRAAATEQLQ IWGERNNIPV VAQGHGSDSA SVIFDAMQSA KAKNIDVLIA
DTAGRLQNKT HLMAELEKVV RVMRKADSSA PHEGMIVLDA GTGQNAINQV ELFNKVVPLT
GITITKLDGT AKGGVVFNIA ETTDVPIRYI GVGESIDDLR AFSPKQFVAA LFETDDKE