| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0881 |
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| Symbol | |
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| ID | 3514881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1049066 |
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| End bp | 1052248 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637669569 |
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| Product | putative type I site specific deoxyribonuclease HsdR |
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| Protein accession | YP_264168 |
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| Protein GI | 71065441 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0350782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAATTCA CCGAAGACAG ACTTGAGCAA GCCATTATTG AGCTACTAGC AGCGGAAGGC
TATCCGCACA CGGTTGGTGA AGCGCTTGAC CGCAACCCTG ATGATGTGCT GATTAAGTCT
GACCTTCGAC AGTTTCTAGC GACCCGTTAT AGAGATGACT TGATCACTGA TTACGAGATT
GAGTCCATCA TTCATAAGCT CGAATACCTT CCTGCCTCCG ACCTGTACGA AACCAACAAA
GCCATCATGA AGTTTGTCGC TGATGGCTTT TTACTCAAGC GTGAAGACCA TACCCAAAAA
GACTTATACA TCCAGCTGAT TGATTATGAG GCACTCGATA ACAATCGCTT TCGCATCGTC
AATCAGATGG AAATACAAGG TTTTGAGCGG CGTATTCCTG ATGGCATTCT CTATATCAAT
GGCTTACCAC TGGTGGTGTT TGAGTTTAAG AGCAGCATCC GTGAAGATGC CACCATGTTT
GATGCCTATA CCCAGCTGAC CACCCGTTAT AAGCGCGATA TTCCAGAGCT GTTTAAATAC
AACGCCCTAT GCGTCATCAG TGATGGGGTC AACTCAAAAA TGGGGTCATT CTTTGCCCCT
TATGAGTTTT ACTATTCTTG GCGCAAAGTG ACGGGCGATG AGAAGCTTGA GAAGGATGGC
ATCCATTCCT TACTAACGAT GATAAGCGGC TTATTTGATA AAGCACGTTT GCTTGATGTC
ATTCGAAACT TTATCTATGT GCCTGACAAG TCAAGCAAGG AAGAGAAAAT CGTTTGTCGT
TATCCACAGT ATTATGCCGC CACCAAACTG TTTGACAATA TTAAGCGCCA TATGAAAGTG
CTGGATACAA ACGGCAAGTT TGATGAGAGT GATGCTTTAC GAGACGGTAA AGGTGGTACG
TACTTTGGCG CGACTGGCTG TGGTAAGAGC TTTACCATGC TATTTCTAGC CCGTCTGCTG
ATGAAAGACG CTGCGCTTGG TAGTCCAACC ATTATCTTAA TCACTGACCG CACCGATTTG
GATGATCAGT TATCAAAAAC CTTTACCAAT GCCAAAACCT ATATTGGTGA TGACGAAATC
ATCAGTGTCG AGAGTCGAGC TGAGCTACGA GAGAAGCTGA AAGGGCGTAA AAGTGGTGGC
GTGTTCCTGA CGACCATTCA TAAGTTCACC GAAGACTTAG CCTTACTGAC CGAGCGTACC
AACGTCATCT GTATCTCTGA TGAAGCGCAC CGTAGCCAAA TCAATCTCCA ACAAAAAATC
ACCGTCACCG AAGATGGGGT CAAAAAGACC TACGGCTTTG CTAAATACCT GCATGATTCA
TTGCCTAATG CTACTTACGT CGGCTTCACA GGTACGCCAA TTGATGCCAC CCTAGATGTC
TTTGGTCCAG TCGTTGATAG CTATACCATG GTCGAGTCGG TATTCGATGA AATCACTGTG
CGTATTGTCT ATGAAGGTCG CGCTGCCAAA GTACTCCTTG ATAGCAAGCA GCTCGATGAA
GTAGAAAAGT ATTACAAGCA CAGCGTAGAA TCGGGCGCCA ATGAGTACCA GATAGATAAA
AGCAAAAAAG CCATGGCGAG TATGTCTACC ATACTAGTTG ATCCTGACCG CATCCGCGCC
ATCGCAGAAG ACTTCGTTCA GCATTATGAA GCGCGCGTTG CTGAGGGCAC CACACAGAAA
GGCAAGGCGA TGTTTGTCTG TAGTAGCCGT GAAGCCGCCT ATCAGTTATA TAAAGACATC
ATAGAGCTGC ATCCTGAATG GGATGAGATC AGAGCGTGCG AGGAAGGCTC AACCTTATCT
GAAAGCGACA AGAAAAAAGT CATGCCTATA GAGCGAGTCA AAATGATCAT GACTCGTAAC
AAGGACGATG AAAAAGGCAT GTGGGACAAT CTTGGTAATA AAGACTACCG CAAAGAGCTC
GACCGCCAGT TTAAAAACGG CAAGTCTAAC TTTAAGATCG CCATCGTCGT CGATATGTGG
CTTACAGGCT TTGACGTGCC ATTTCTAGAT ACCATCTACA TTGATAAACC GCTGCAAAAG
CATAGCCTGA TTCAAACCAT CTCACGGGTC AACCGTAAGT TCGAAGGCAA AGAAAGCGGC
TTAGTGGTTG ATTACATTGG CATCAAAAAG CAGATGAACC TTGCGCTCTC GCATTACACC
GGCGGTCAGA TTCAAAACTT AGAAGATATC CAAAAATCAG TCGTGGTAGT GAAAGACCAC
TTAGACCTAC TGGATACGGT CTATCATAAG TTCGACTCTA GCCTTTACTT CAACGGCACG
CCACTAGAGC AGCTCAATTG CTTAAACGCG GCGGCTGACT TTGCCCTGCA ATCCAAAAAG
CTAGAAAAGC GTTTTATGGA TTTAGCCAAG CGTCTTAAGT CTGCCTATGA TATTTGCGTG
GGTAGTGAGG CGCTAACCAA GGCGCACAAG GACAAGATTC ATTACTACTT AGCTATTCGT
ACCATCATCT TTAAAATCAC CACCGGCGGC GCGCCTGACG TTGAACAGAT GAACCAAAAG
GTACGTGATC TGGTTAAAGA TGCGCTAATG AGTGACGGGG TAGAAGAAAT CTTTAAGCTC
GGTGATAACA CCGACGGTGA AATCGATATC TTCGATGAAG ACTACTTAGC CAAGCTTGAG
GTGATTAAGC AGCCCAATAC CAAGTTAGAG CTGCTACAAC AGCTGCTCGC AAAAGCCATT
GGTGAGCTGA AAAAGACCAA CAAGGTGAAG GGTGTCGATT TCAGTAAAAA AATGAATGCG
CTCGTTGAGA AGTATAACGA CCGCGACGAG AACGATATCT TAAACTCTAA GGTCTTCAAT
GATTTTACTG ACCATATTAT CGACTTAATA CATGGCGTGA AGAAAGAGAT GCAAGCTTTT
GGTGAGATGG GCATTGATAT CGAAGAAAAA GCTTTCTATG ATATTTTGCT ACTGTTAGCT
CATAAGTATG ATTTTAGCTA TCCAGAGGAT AAACTCATTG AGTTATCCAA AGAGGTCAAA
AATCTTGTAG ACGATAAAGC TAAGTATACT GACTGGAATA AAAGAGACGA CATTAAAGCT
GAGCTGGAAT TTGATCTGAT GATATTGCTC GATGAGTGGG GCTATCCACC TGTTGACTCA
AAAGAGGTCT ATAAAGAGAT ATTTGAGCAG GCTGAGAATT TTAAGAAGAA TAGGGTGGTT
TAG
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| Protein sequence | MKFTEDRLEQ AIIELLAAEG YPHTVGEALD RNPDDVLIKS DLRQFLATRY RDDLITDYEI
ESIIHKLEYL PASDLYETNK AIMKFVADGF LLKREDHTQK DLYIQLIDYE ALDNNRFRIV
NQMEIQGFER RIPDGILYIN GLPLVVFEFK SSIREDATMF DAYTQLTTRY KRDIPELFKY
NALCVISDGV NSKMGSFFAP YEFYYSWRKV TGDEKLEKDG IHSLLTMISG LFDKARLLDV
IRNFIYVPDK SSKEEKIVCR YPQYYAATKL FDNIKRHMKV LDTNGKFDES DALRDGKGGT
YFGATGCGKS FTMLFLARLL MKDAALGSPT IILITDRTDL DDQLSKTFTN AKTYIGDDEI
ISVESRAELR EKLKGRKSGG VFLTTIHKFT EDLALLTERT NVICISDEAH RSQINLQQKI
TVTEDGVKKT YGFAKYLHDS LPNATYVGFT GTPIDATLDV FGPVVDSYTM VESVFDEITV
RIVYEGRAAK VLLDSKQLDE VEKYYKHSVE SGANEYQIDK SKKAMASMST ILVDPDRIRA
IAEDFVQHYE ARVAEGTTQK GKAMFVCSSR EAAYQLYKDI IELHPEWDEI RACEEGSTLS
ESDKKKVMPI ERVKMIMTRN KDDEKGMWDN LGNKDYRKEL DRQFKNGKSN FKIAIVVDMW
LTGFDVPFLD TIYIDKPLQK HSLIQTISRV NRKFEGKESG LVVDYIGIKK QMNLALSHYT
GGQIQNLEDI QKSVVVVKDH LDLLDTVYHK FDSSLYFNGT PLEQLNCLNA AADFALQSKK
LEKRFMDLAK RLKSAYDICV GSEALTKAHK DKIHYYLAIR TIIFKITTGG APDVEQMNQK
VRDLVKDALM SDGVEEIFKL GDNTDGEIDI FDEDYLAKLE VIKQPNTKLE LLQQLLAKAI
GELKKTNKVK GVDFSKKMNA LVEKYNDRDE NDILNSKVFN DFTDHIIDLI HGVKKEMQAF
GEMGIDIEEK AFYDILLLLA HKYDFSYPED KLIELSKEVK NLVDDKAKYT DWNKRDDIKA
ELEFDLMILL DEWGYPPVDS KEVYKEIFEQ AENFKKNRVV
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