| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0829 |
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| Symbol | nth |
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| ID | 3514329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 996160 |
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| End bp | 996855 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637669516 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III |
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| Protein accession | YP_264116 |
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| Protein GI | 71065389 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.141999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.027211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAA CCGTCAAACA TAAAACAGCT GATACCCCAC CATCGAGGCG CATGCCCAAT
CGTGACATAC GTCCATTTTT TGAAAAATTG GCAGCGACGA TTGACGAGCC CGTCACTGAG
CTAAATTATG GTAGCAATTT TGAGCTACTT ATCGCAGTAA TTTTATCAGC ACAAGCAACC
GACATCAGCG TCAATATTGC CACCGATCAA CTCTATCCGG TAGCGAATAC GCCTGAGGCG
ATACTCGCTT TAGGCGAAGA AGGACTTAAA GCGTATATTA AGAATATAGG CTTGTTCAAT
GCTAAAGCTA AAAACGTTAT CAAAACCTGC CGCGATCTTA TAGAAAAATT TGATAGTACC
GTCCCTGACA ATCGCAAAGA CTTAGAATCG CTTGCCGGTG TTGGTCGCAA GACGGCAAAC
GTGGTCTTAA ATACCGCCTT TGGTCAACCA ACCATGGCAG TCGATACGCA TATTTTCCGA
GTGGGCAATC GTACTGGGCT TGCCACTGGC AAAAACGTTT TAATCGTTGA AAATAAGCTG
GTCGAGCGTA TTCCAGATGA CTATATCGTG GATGCCCACC ATTATCTGAT TTTGCACGGA
CGCTATACGT GTCAAGCACG GACGCCAAAA TGCGGTGCTT GCCCTGTTTA TGACGAATGT
ATGTTTAAAG ACAAAGCGGC GTTTTTAGAG TTGTGA
|
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| Protein sequence | MSKTVKHKTA DTPPSRRMPN RDIRPFFEKL AATIDEPVTE LNYGSNFELL IAVILSAQAT
DISVNIATDQ LYPVANTPEA ILALGEEGLK AYIKNIGLFN AKAKNVIKTC RDLIEKFDST
VPDNRKDLES LAGVGRKTAN VVLNTAFGQP TMAVDTHIFR VGNRTGLATG KNVLIVENKL
VERIPDDYIV DAHHYLILHG RYTCQARTPK CGACPVYDEC MFKDKAAFLE L
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