Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0823 |
Symbol | clpB |
ID | 3514323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 988604 |
End bp | 991201 |
Gene Length | 2598 bp |
Protein Length | 865 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637669510 |
Product | putative chaperonin clpA/B |
Protein accession | YP_264110 |
Protein GI | 71065383 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00549001 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGATTTG AAAAGTTTAC TCAAAAACTG CAATCTGCGA TACAAGAGGC ACAAAGTCTG GCGTTAGGGC GTGACCATAC CGGTATTGAT CCGGTGCACC TGCTTGCAGT CTTGCTGCAA GATGAGTCTA ACTTGTCTAT CTGCCAACAA GCAGGCGCGT CTATTCCTGC GTTAAAAAAT GGCGTGGCAA AGGCATTAGA TAACCAAGCA ACGATTTCGG AGCCGACAGG TGATGTCAAT CTTAATCCAA ACTCGGTTAA GATTTTGAAT TTGGCAGATC GCCAAGCGCA AAAAGAAGGC GATGATTTTA TCGCGACTGA ATGGGTGATG TTGGCACTTG CTGAGCAAGG CGATACCAAA AAAATATTTG AAAGTGCTGG CGTTACAGCC AATAAATTAA AAGCGGTGAT TGAGCAATTG CGCGGCGATG ATACTGTGAA TAATCAAAAT GCAGAAGATC AGCGTGATGC CCTTAATAAA TACACCATTA ACTTAACTGA GCAAGCAGAG CTTGGTAAGC TTGATCCGGT GATTGGTCGT GACGAAGAGA TTCGACGTAC TATCCAAGTG TTGTCACGCC GTACCAAAAA CAATCCTGTG CTCATCGGTG AGCCAGGTGT TGGTAAAACG GCTATTGTAG AAGGCTTGGC ACAAAAAATC ATCAATGGTG ATGTACCAGA AGGTTTACGT CGTAAAGAAG TGCTGTCGTT GGACTTAGGT GCTTTGATTG CTGGTGCAAA ATTCCGTGGT GAGTTTGAAG AGCGTCTCAA AGCGGTACTC AGTGACTTAT CGAAGCAAGA AGGTAACGTT ATCTTATTTA TCGATGAGCT ACATACGCTA GTTGGGGCAG GTAAGGCGGA TGGTGCGATG GACGCCGGTA ATATGCTAAA ACCAGCGCTT GCACGTGGTG AGCTGCATTG CGTCGGTGCG ACTACTTTAG ATGAATATCG TAAGTATATT GAAAAAGATG CGGCGCTTGA GCGTCGTTTC CAAAAAGTAT TGGTTGATGA GCCGACGGTT GAAGATACCA TTGCGATTTT ACGTGGACTA AAAGAGCGTT ATGAGCTGCA TCATGGGGTC GATATCCAAG ACAGCGCCAT CATTGCGGCT GCTCGTATGA GTCATCGTTA TATCACTGAT CGCAAGCTGC CGGATAAAGC CATTGACTTG ATTGATGAAG CTGCGAGTCG CTTACGTATG GAGATGGACA GCAAACCTGA GTCACTAGGT AAGCTCGATA GTCGTTTGAT ACAGCTAAAA ATGCAGCGTG AAGTGCTCAA AAATGAAGAA GACGCGGGCG CGCAAGCAGA GCGTAAAGTG CTTGATGCAC AAATTGAAGA GCTGGAAAAA GAGTACGCCG ATCTTAACGA GATTTGGCAA GCAGAAAAAG CTTTGGTTAA AGGCAGTCAG CAGTTAAAAG ACGAGCTGGA CAAAGCCCGT ATTGCTTATG ATAAAGCCAG CCGCGAAGGC GATTATGAGA CCATGAGCAA GCTGCAGTAT GAGACGATAC CGCAGTTAGA GCGCCGTATC CATGAATCTG ATTTGGCAGA GCAAAAAGAG CAGACTGGTG AAAATAGTGG TGTAAAACTG CTGCGTAACA AAGTCACGGA CAATGAAATC GCCGAAGTCG TTGCTGCAGC GACGGGTATT CCAGTTAGTA AAATGCTGCA AGGCGAACGT GACAAGATGC TGGCGATGGA AGAAAACCTC CATGAGCGCG TCATCGGTCA AGATGAAGCG GTCGAAGCAG TAGCCAATGC AGTACGCCGT AGCCGTGCTG GCTTGTCTGA TCCAAACCGT CCTTCAGGCT CGTTCTTGTT TTTAGGGCCT ACGGGTGTCG GTAAAACAGA GCTGACCAAA TCGTTGGCGA ACTTCTTGTT TGATTCAGAA GATGCTATCG TCCGTATCGA TATGAGTGAG TACATGGAGA AGCATAGCGT CAGCCGTTTG GTGGGCGCGC CTCCAGGTTA TGTGGGCTAT GAAGAAGGTG GTGCTTTGAC GGAGGCGGTA CGCCGTAAGC CTTATAGTGT GATTTTGTTT GATGAAGTTG AAAAAGCGCA TCCTGATGTG TTTAATATCT TGCTACAAGT ATTGGACGAT GGTCGCTTGA CGGATTCACA AGGTCGCGTG GTAGACTTCA AAAACACCGT CATTATTATG ACCAGTAACT TGGGTTCGCA CAAAATCCAA GAAATGGTTG GCGAGAGCTA TGAAGATATC AAAGCTGAGG TGATGGATTC GGTTGGACAG CATTTCCGCC CAGAGTTTGT CAACCGTATC GATGAGATCG TGGTATTCCA TCCGCTAGGT ATGTCACAGA TGGCTGGTAT TGCTGCGATT CAGTTGAACC GCTTGCGTCA GCGTCTATAT GAGCGTGAGT TGGATATCGA GTTATCGGCA GATGCGATGA ACAAACTGGT TGCAGTTGGC TATGATCCTG TTTATGGTGC GCGTCCACTT AAACGTGCGA TCCAACAAGA GATTGAAAAC CCATTATCAT TGAAATTGCT GGCAGGTGAT TTTGTCGCTG GTGATATCAT CAAAGTCGAT GTCGGTGCTG ATGACAAACT GACCTTTGAT AAGCTTAGAA TGAGCTAA
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Protein sequence | MRFEKFTQKL QSAIQEAQSL ALGRDHTGID PVHLLAVLLQ DESNLSICQQ AGASIPALKN GVAKALDNQA TISEPTGDVN LNPNSVKILN LADRQAQKEG DDFIATEWVM LALAEQGDTK KIFESAGVTA NKLKAVIEQL RGDDTVNNQN AEDQRDALNK YTINLTEQAE LGKLDPVIGR DEEIRRTIQV LSRRTKNNPV LIGEPGVGKT AIVEGLAQKI INGDVPEGLR RKEVLSLDLG ALIAGAKFRG EFEERLKAVL SDLSKQEGNV ILFIDELHTL VGAGKADGAM DAGNMLKPAL ARGELHCVGA TTLDEYRKYI EKDAALERRF QKVLVDEPTV EDTIAILRGL KERYELHHGV DIQDSAIIAA ARMSHRYITD RKLPDKAIDL IDEAASRLRM EMDSKPESLG KLDSRLIQLK MQREVLKNEE DAGAQAERKV LDAQIEELEK EYADLNEIWQ AEKALVKGSQ QLKDELDKAR IAYDKASREG DYETMSKLQY ETIPQLERRI HESDLAEQKE QTGENSGVKL LRNKVTDNEI AEVVAAATGI PVSKMLQGER DKMLAMEENL HERVIGQDEA VEAVANAVRR SRAGLSDPNR PSGSFLFLGP TGVGKTELTK SLANFLFDSE DAIVRIDMSE YMEKHSVSRL VGAPPGYVGY EEGGALTEAV RRKPYSVILF DEVEKAHPDV FNILLQVLDD GRLTDSQGRV VDFKNTVIIM TSNLGSHKIQ EMVGESYEDI KAEVMDSVGQ HFRPEFVNRI DEIVVFHPLG MSQMAGIAAI QLNRLRQRLY ERELDIELSA DAMNKLVAVG YDPVYGARPL KRAIQQEIEN PLSLKLLAGD FVAGDIIKVD VGADDKLTFD KLRMS
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