| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0786 |
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| Symbol | sppA |
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| ID | 3514634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 939936 |
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| End bp | 940991 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637669473 |
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| Product | signal peptide peptidase |
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| Protein accession | YP_264073 |
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| Protein GI | 71065346 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.917383 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAACT GGCCGCCAGA CCCTAACAAA CGTCCTGATA ATTCGGCAAA TCAGCCAGCG
CCGATGCAGC AATCAAACCA GCCGAGCGGG CAAGAATGGC GACTGATTGA AAATACTTTA
TTAGCCAGCG TGGTTGAGCA ACGCCGTGCC CGTCGCTGGA GTATCTTCTT TAAGCTATTG
ACCTTCGGCT ATATTCTATT GATATTTTTG ACGATTGGTC GTAGTTGCAG CACTGAAGCA
CCAACTGCTC TTGACGGTAT CGACACCAAT AAGCCACATT TAGCAGTGGT TGAGATTCAA
GGAACTATTA GCAGTGGTGA TGTCGCCAAC GCTTATGACG TCAATGATGC GCTAACACGC
GCCTTTGAAA ATAGTAACTC AAAGGCAGTA GCTCTAGATA TCAACTCACC GGGTGGCTCG
CCAGTACAGT CGGATGAAAT CTGGCAAACC ATGATGGATT TACGTAAACA ATATCCGGAT
AAAAAGCTTT ATGCGGTGAT TGGCGATATG GGCGCTTCAG GCGCGTATTA TATTGCATCA
GCGGCTGATG AGATTTATGT CAACCCATCA AGCCTCGTTG GTTCGATTGG CGTTATTATG
CCAAGCTACA ATGTAAAAGG CTTAATGGAT AAGGTTGGTG TAGAAGATCG CACCATTACG
GCGGGTGAGT ATAAAGATAT CTTGAGTCTG TCACGTCCAT TAACGGATTA TGAAGAACAG
CATGTCGAAA AAGTGTTGGA CAATACTCAT AAGCATTTTA TCAATGCTGT AAAAGAAGGT
CGTGGTGATC GTCTAAAAAA TCCTGAACAA AATAAGCTGT TTTCAGGACT ATTTTGGACA
GGAGAGCAAT CTATTGAGCT TGGCTTGGCT GATAAGAAAG GCAGTATCTC AAGCTTAGAG
AAGCAGCTTA AGCTAAATAA CGTGGTCAAT TATACGCCGA GTGATCCGTT CCAATTGTTT
ATGGATCGCT TTGCCGTCAA ATTGGGCGCA GGTGTGGGTT CAAGCATTAA TCTTGATCTC
TTGCCACAAG AAGAAGGCAA CGCGCAGATG CGTTAA
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| Protein sequence | MPNWPPDPNK RPDNSANQPA PMQQSNQPSG QEWRLIENTL LASVVEQRRA RRWSIFFKLL
TFGYILLIFL TIGRSCSTEA PTALDGIDTN KPHLAVVEIQ GTISSGDVAN AYDVNDALTR
AFENSNSKAV ALDINSPGGS PVQSDEIWQT MMDLRKQYPD KKLYAVIGDM GASGAYYIAS
AADEIYVNPS SLVGSIGVIM PSYNVKGLMD KVGVEDRTIT AGEYKDILSL SRPLTDYEEQ
HVEKVLDNTH KHFINAVKEG RGDRLKNPEQ NKLFSGLFWT GEQSIELGLA DKKGSISSLE
KQLKLNNVVN YTPSDPFQLF MDRFAVKLGA GVGSSINLDL LPQEEGNAQM R
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