| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0782 |
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| Symbol | lolD |
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| ID | 3514630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 934537 |
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| End bp | 935217 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637669469 |
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| Product | ABC lipoprotein exporter, ATPase subunit, LolD |
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| Protein accession | YP_264069 |
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| Protein GI | 71065342 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.000690329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGCTA TCTTAAAAGC GACCAATATT AATAAGATAT ACGATGAAGG CGCCGTGAGT
ACCCAAGTTT TGACTGGTTT GGATTTGACT GTCAATGCCG GTGAGCGTAT TGCTATCGTT
GGCACCAGTG GGTCAGGAAA GAGTACCTTG CTTCATCTGC TTGGTGGGCT TGATACGCCA
ACCAGTGGTG AGGTTTGGTT GCATGGTCAG TTATTAAACA GTATGAATGA GACCGAACGC
GGTGCGATGC GTAATAAGCA TTTGGGATTT ATTTATCAGT TCCATCATCT GTTGGCTGAA
TTTACTGCCG TTGAAAACGT TGCCATGCCA TTATTGATGC GCTCAGAAGT ATCGACGGCT
GAAGCGCGTC AACAAGCCAT CGATATTTTA AACAGTGTTG GTCTTGAGCA TCGTTTGGCA
CATAGACCTG GTGAGCTGTC AGGTGGTGAG CGTCAGCGTG TGGCGATTGC GCGTGCTTTG
GTCACTAAGC CGTCGCTTAT TTTGGCAGAT GAGCCAACGG GTAACCTAGA TTATGACAAT
GCGCAAAGCG TGTTTGGATT ATTATCAGAG CTACAAAGCA CCATGCAAAC AGCACTATTG
ATGGTCACCC ATGATCGCAA TCTAGCAGCG CTTGCTGATC GTCAGCTGTT ATTACGCAAT
GGTCATTGGG AAAATTATTA A
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| Protein sequence | MSAILKATNI NKIYDEGAVS TQVLTGLDLT VNAGERIAIV GTSGSGKSTL LHLLGGLDTP
TSGEVWLHGQ LLNSMNETER GAMRNKHLGF IYQFHHLLAE FTAVENVAMP LLMRSEVSTA
EARQQAIDIL NSVGLEHRLA HRPGELSGGE RQRVAIARAL VTKPSLILAD EPTGNLDYDN
AQSVFGLLSE LQSTMQTALL MVTHDRNLAA LADRQLLLRN GHWENY
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