Gene Psyc_0778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0778 
Symbol 
ID3514278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp928971 
End bp930452 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content44% 
IMG OID637669465 
Productcbb3-type cytochrome c oxidase subunit I 
Protein accessionYP_264065 
Protein GI71065338 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3278] Cbb3-type cytochrome oxidase, subunit 1 
TIGRFAM ID[TIGR00780] cytochrome c oxidase, cbb3-type, subunit I 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAC AAAACACAGC ACTCACCCCC ATTGACCGTG AGTACGAAAT CACTATCGTA 
CGATTTTTTA CGATCATGGC CATAGTATGG GGCATAATCG GCATGAGCCT TGGTGTGTTC
ATTGCTTCAG AGTTGGTTTG GCCAGCTCTC AACGCTGACA TTCCATGGAT AACATTTAGT
CGTTTAAGAC CACTGCACAC CAATGCAGTT ATTTTTGCGT TCGGTGGCTC AGCCTTGTTC
GCAACGTCTT ATTACATCGT TCAGCGTACC TGTAAAACAA GATTATTTGC GCCATATCTG
GCTTGGTTTA CCTTTTGGGG GTGGCAGGCA GTGATCGTAT CTGCCGTGAT TACCCTTCCA
CTAGGTTTAA CCTCGACCAA AGAATATGCT GAGCTTGAAT GGCCGATCGA TATTCTGATT
GCCTTGGTAT GGATCTCTTA TGCTATTGTT TTCTTCGGCA CGCTCATTAA ACGTAAAACC
TCTCATATCT ACGTGGCTAA CTGGTTCTTT GCTGCCTTCA TTATTACGAT TGCACTACTG
CATATTGTAA ACAGTATGGC GATTCCTGTT AGTGCATTTA AGTCTTACTC GCTATTTGGC
GGTGCAACCG ATGCCATGGT GCAATGGTGG TACGGGCATA ATGCGGTAGG CTTCTATTTG
ACCGCTGCCT TCTTAGGCAT GATGTATTAC TTTGTGCCAG TACAGATTGG TCGCCCTATT
TACTCTTACC GTTTGTCTAT CGTTCACTTT TGGGCATTGA TTGCTTCATA TATGTGGGCT
GGTGGTCACC ATTTGCATTA TTCAGCGCTT CCAGATTGGA CGCAGTCTTT AGCAATGGTG
TTCTCAATCA TTCTATTCGC ACCGTCTTGG GGTGGTATGA TTAACGGTGT ACTAACGCTA
TCAGGTAGTT GGGATAAACT GCGTACGGAT CCTATCATTC GCTTTATGAT TGTGGCATTG
TCGTTCTATG CGATGTCAAC GTTCGAAGGC CCAATGATGG CTATTAAGAC GGTCAATGCC
CTATCGCATA ACACCGACTG GACAGTAGGT CACGTACACT CAGGTGCGCT TGGCTGGGTG
GGTATGATTA CTATTGGTTC GCTATACGTA CTGTTACCGC GTATTTATAA TAAGCCAAAA
ATGTATTCTA TTAGCCTTAT CACCACGCAT TTCTGGCTAG CAACAGCGGG TACTATCTTC
TATATCGTAT CTATGTGGAT TTCAGGTATT GGCCAAGGCA TGATGTGGCT TGCGACTAAC
CCTGATGGTA CTTTGATATA CAGCTTTGTT GATACCGTTG AGTTCTCGCA TTTCCCATAT
ATGGGTCGTG CGTTTGGTGG TCTTCTCTAT GTATCTGGTA TGTTTGTGAT GGCTTATAAT
GTCTATAAAA CAATCAAGAT GCCAGAAGGT AAGCCAGTAG ATATTGCTGA TCCGACTGAT
CATGAACCTA GTGTCGATCA AATCTCGACA GCTAAAGTAT AA
 
Protein sequence
MSLQNTALTP IDREYEITIV RFFTIMAIVW GIIGMSLGVF IASELVWPAL NADIPWITFS 
RLRPLHTNAV IFAFGGSALF ATSYYIVQRT CKTRLFAPYL AWFTFWGWQA VIVSAVITLP
LGLTSTKEYA ELEWPIDILI ALVWISYAIV FFGTLIKRKT SHIYVANWFF AAFIITIALL
HIVNSMAIPV SAFKSYSLFG GATDAMVQWW YGHNAVGFYL TAAFLGMMYY FVPVQIGRPI
YSYRLSIVHF WALIASYMWA GGHHLHYSAL PDWTQSLAMV FSIILFAPSW GGMINGVLTL
SGSWDKLRTD PIIRFMIVAL SFYAMSTFEG PMMAIKTVNA LSHNTDWTVG HVHSGALGWV
GMITIGSLYV LLPRIYNKPK MYSISLITTH FWLATAGTIF YIVSMWISGI GQGMMWLATN
PDGTLIYSFV DTVEFSHFPY MGRAFGGLLY VSGMFVMAYN VYKTIKMPEG KPVDIADPTD
HEPSVDQIST AKV