| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0727 |
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| Symbol | |
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| ID | 3514573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 865068 |
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| End bp | 867113 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637669414 |
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| Product | BCCT family choline/carnitine/betaine transporter |
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| Protein accession | YP_264015 |
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| Protein GI | 71065288 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAGCT CGCCTTCCGA GGATACAACA CAAACCATGA GTCTAAACAA AACAGTGTTT
ATAGGCTCAG CTGTTATTTC TATTTTATTA ATCATTTGGA CCATTGTTTT TCCAACTTAC
AGTGGGGCTT TGCTCGGCGC TGGCATGGCG TGGGTATCAG AGAGCTTCGG CTGGTATTAC
ATGTTGGTAG TCGCCGCTTA TAGTATTTTT GCCTTGTTCG TTGGATTCTC TAAATATGGT
GATATCAAGC TCGGTCAAGA CCATGAAAAG GCGCAATTTC CCTTTTTAGC ATGGGCAGCC
ATGCTGTTCT CAGCGGGTAT TGGCATCGAC TTATTGTTCT TTGGTGCCTC CGAGCCTTTG
ATGCATTACC TCACGCCACA TGCTGGACTT GCGCCGGCAA GTGAAGAGGC CATGCGCCAA
GCCGTCGCCC AAACGTTCTT ACATTGGGGT CTGCATGGTT GGGGCATTTA TGCACTGATC
GGTATGGCGT TGGCATACTT TGCTTATCGC AAAAATATGC CTCTGGCGCT CCGATCTCCC
TTAACCCCAA TCTTTGGCGA GCGCTTAATT AAAGGCTGGC TAGGTGATGG TATCGATACC
TTTGGCGTGG TATGTACGCT AATGGGGATT GCGACCAGTT TGGGCATTGG TGTCCTACAA
GCTAATGCGG GACTGACGCA TGTGTTCGGT ATCGAATCGA GTAAAATGGT TCAGACCATT
ATCATCGTTT GCGTTGTTGT GGCGGCTGCA ATATCAGCAA TGACGGGTGT TGAGAGAGGC
GTGCGTCGCC TGTCTGAATT CAATATGCTT GCGGCTATAT TATTTCTGGT TGCCATATTG
GTAATGGGCA ACACGGTTTA TCTGCTTAAT ACATTCACCC AAAGCGTGGG TCAATATTTC
CAAACGATCG TTGCCAAGAC TTTTGATGTC TATGCTTACG ATGGTGCTGC TGGTGCCGAA
TGGAAGTCAG GCTGGACGGT ATTTTTCTGG GCATGGTGGG TTGCATGGGC GCCTTTCGTT
GGCTTGTTTA TCGCACGTAT CAGCCGTGGC CGTACCTTAC GCGAGTTCGT CTTTGGCGTG
ATGTTTATTC CACTGGGTTT CATCTTTGCT TGGTTTTCTA TCTTTGGTAA TTCAGCGATA
GAATTGGTTG CTAATGGTGC CACTGAGCTT GGTGAGGTCG CGGTTAACGA TGCTGCCATG
GGTCTGTTTG CATTATTTGA GTACTATCCG TACAGTGATG TGCTGTCTCT TGTAGGCGTC
ATCATAGGTT TGGTATTCTT TATCACATCA GCCGACTCAG GTGCTTTAGT ATTGGCCAAT
CTGAGCTCAA GAGGGCTGAT TAATGGTGTT GATGCACCCG TATGGTTACG GTTGTTTTGG
GCAGCAGCGA CCGGTCTTAT CACGCTAGGC TTACTATTTG CTGGCGGGTT TTCCTCATTG
CAATCAGTGT CTGTTATAGC AGGATTGCCT TTCTCAGTTA TCTTAGTGCT CTATATGATA
GCCATGTGGA AATCGCTGAA AGAAGAGGGT AACAAGCGTA AAGCGAGTAC GATAGGTACG
GCTAATGTGC TGGATAATGG CAAAAGCTGG AAAGCACGCT TGCAACGTAT TGTCAGCTTT
CCTAAACATG CACAAGTTGA GCATTTTTTA CAGACTATCG TATTGCCAGC CATGACTGAC
GTTGAAAGCG AGCTAAGAGC AGGTGGACTC AAAACAGCTT TGGTCGTCCG AAATCCTGAG
CATATTGGTC AAGATATCGA TCAAGGTAAG GACCAAGAAA GTGTGCAAAT AGAAGGTCTG
AAACTACAAG TCGGCCATGG CGATCAAGAT GACTTTATTT ATGAAGTCAA TTTGGTGAAA
GCTGAGCGAC CTAACTTTAC GCTTAATACG TCAAGCAAAC TTGCCGAATA TTATTATAGA
GCTGAAGTCT TCTTGAGTGA TGGGTCGCAA GAGTACGATT TGGTTGGCTA TAGTAAAGAG
CAAGTATTGG TCGATATTCT TAACCAGTAT GAGCGTCATA TGCAGTATTT ACATTTAGAA
CGGTAA
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| Protein sequence | MYSSPSEDTT QTMSLNKTVF IGSAVISILL IIWTIVFPTY SGALLGAGMA WVSESFGWYY
MLVVAAYSIF ALFVGFSKYG DIKLGQDHEK AQFPFLAWAA MLFSAGIGID LLFFGASEPL
MHYLTPHAGL APASEEAMRQ AVAQTFLHWG LHGWGIYALI GMALAYFAYR KNMPLALRSP
LTPIFGERLI KGWLGDGIDT FGVVCTLMGI ATSLGIGVLQ ANAGLTHVFG IESSKMVQTI
IIVCVVVAAA ISAMTGVERG VRRLSEFNML AAILFLVAIL VMGNTVYLLN TFTQSVGQYF
QTIVAKTFDV YAYDGAAGAE WKSGWTVFFW AWWVAWAPFV GLFIARISRG RTLREFVFGV
MFIPLGFIFA WFSIFGNSAI ELVANGATEL GEVAVNDAAM GLFALFEYYP YSDVLSLVGV
IIGLVFFITS ADSGALVLAN LSSRGLINGV DAPVWLRLFW AAATGLITLG LLFAGGFSSL
QSVSVIAGLP FSVILVLYMI AMWKSLKEEG NKRKASTIGT ANVLDNGKSW KARLQRIVSF
PKHAQVEHFL QTIVLPAMTD VESELRAGGL KTALVVRNPE HIGQDIDQGK DQESVQIEGL
KLQVGHGDQD DFIYEVNLVK AERPNFTLNT SSKLAEYYYR AEVFLSDGSQ EYDLVGYSKE
QVLVDILNQY ERHMQYLHLE R
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