Gene Psyc_0719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0719 
Symbol 
ID3514565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp857655 
End bp860012 
Gene Length2358 bp 
Protein Length785 aa 
Translation table11 
GC content46% 
IMG OID637669411 
ProductSignal transduction histidine kinase sensor 
Protein accessionYP_264012 
Protein GI71065285 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00268576 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTG TTGGTCGGTT TGGTAGTATT TCCACCCGTA TATTGATTAT CTTAACATTG 
GCTTTTTTAC TTATTATTTT GATGGTCTAT TGGGTCATCG AAACCCAAGC TAAGCCGCGC
ATACTGGAGA TGACCTCAGA GACAGTGGTT GAAACAGGTA ACGAAGCCAT TAACAGCATC
ATGGCGAGTA TCAATCATGT CGATGGAATG GCGAAAGCCA CCAGTACGAT GGCGGGCGGC
TTGCCAAAAC AAGACGCCCT TTATAAAGAA ACCTTTGGCA ATCTCATGCA ACAAACGGAT
CAACGTATTG TAGGCGGCGG TGTGTGGTTT GACCCTAATA TGTACGCTCA GGGCCGAGAG
CGGCAGTCGT TTGTATGGGC ACGTGATGAG TCAGGCACCA TGCAGCCATT AGAGCGTTAC
AATCAAGCAC GCCAAACGCC TAATCCCTAT TATCGTGATT GGTGGTATAT TCCTGCGATG
TACGCGCGTC ATGACCATTG TGTCTGGAGC CGTGCCTATG TCGATCCAGT GAGTAATCAG
CCGATGATGA CGTGCGCCAA GGCTCTGTAT GACAGTCGCA ATCAAGCTTT TGATGGGGTG
GTGAGTTTCA ATCTGCTATT GGACAACCTC GGCGATGCCA TGAAAAAGTG GCAAGATAAG
CTCGGCGGTT ATGTCTTTTT AGTAGACCTA GACAATCGGT TTTTGACTTT TCCAGATCAG
TCGAAAGTCA TGCATACAAC TGAAGATAGT CGCCAAGGCG AGGTCATAAC GGCACGTCAG
TTGGCAGATG CCAACCCTAA CTTTGCCCCT ATCGCGGACA GTCTAGATAG TATTAATCAG
ACACTGATAG ATGAGGCGGT AGCTAAAGAT AAAAGCCGTT ATACGCTCGC TGCACGTAGT
ATTCTAAGTA CGACCAATCT GGATAAAATC AGCGAGCAAG AGTCCAAGTT GCTCTCAGCA
TTATTACTGT TAAATATCGA CCAAACGTTT AATTTGGTAG AGAGTCATTT GGTCGATACC
ATCGCTGTGC CCAATGATTT TGTGTTGCAG CAGCCCGCCA CTGCTTTTGT CTTTCGCATG
CCGTTTACGT ATTGGAAGAT GGTTATCGTC AAGCCTGATA ATGACATGAT GAGCGTGGCA
AATGCCCTGT CCAATAAACT GATTCAAGCC ATGCTGCTGG GTTTCATTCC TATCTTATTG
TTGACCGCAT GGGTGTTTCG TCGCTATTTT ACGCGGCCGC TAAAGCGCAT GGCACAGTCG
GTGGCTGATA TGGGGGCGTT AATTGAACAA AAAAAATATC AACAATTAAG CGCGCACAAA
CTGCCTCATT CAAATGTCAG CGAAATTCAA ATCATCAGTG AGCAGACCAA TCAACTGATT
GATCGCGTCG TCGAGAATGA AGGCGCACTT GCTGAAATTA ATGTTCATCT AGAAAAACAA
GTCGCCGCCC GCACGCAAGA CTTACAGCAA GCCATGGATG AATTAAAAGC CTCACAAGTA
CATCTGGTGC GCTCCGAAAA AATGGCTACG CTTGGCCAAA TGGTGGCAGG TGTGGCGCAT
GAAGTCAACA CGCCGCTGGG CTACGTGCGA AGTAACATGG AATTGGTTGG CGATAATCTC
ATACGTTTTG ATGAGTTGCT ACAGCATAGC GATCAATTAT TGCATGCCTT AAAAGCGCCA
ACCATCAATC AAGAACAAGT CGAGCAACTG ATAGAGCAAA CCTTACAATG CTGCGAAGAG
ATTAAAGAAG ATGAGGTCAG TGAAGATTTG GCAGAGTTGA TTAAAGATGG ACTTTATGGC
GTCGATCAGA TTGCTGAACT GGTAGTCGGC TTGCGCAACT TTTCTCGAAT TGACGAATCT
AAGGTAAAAG ATGTCGATAT CAATGATTGC ATCAATACCT CATTGATTAT GGCGCGCAAT
AACTTAAAAA ATTTAGACGT CAATACCAAT CTAGCCGAGC TGCCGCTGAT TCAATGTAAT
CCTTCACAAA TCAACCAAGT ATTATTAAAC CTGTTTAATA ATGCCGCCCA AGCCATGCCG
ATTGATCATA AAGGGGTATT ACAGGTCAAC TCGTCTGTCG ATAAGGCGCA GCAGCACATC
ATAGTGAGTG TCAAAGACAA TGGTGTCGGT ATCCAAGAAA GTACGCTGGC GCAGATTTTT
GAGCCGTTTT TTACCACCAA AAAAGCAGGT GATGGCACAG GGTTAGGGCT GGCCATTACG
GCACAAATCA TCGAGCAACA TGCTGGAGGC ATCGAGGTTA GCTCAAGCGT TGGCGAAGGC
ACGACGTTTA CCATCAAATT ACCGATACAG TCTATCGCTC ATAAAAACAA ACCTCCACAA
GCCTTATTCG AAAGTTGA
 
Protein sequence
MKVVGRFGSI STRILIILTL AFLLIILMVY WVIETQAKPR ILEMTSETVV ETGNEAINSI 
MASINHVDGM AKATSTMAGG LPKQDALYKE TFGNLMQQTD QRIVGGGVWF DPNMYAQGRE
RQSFVWARDE SGTMQPLERY NQARQTPNPY YRDWWYIPAM YARHDHCVWS RAYVDPVSNQ
PMMTCAKALY DSRNQAFDGV VSFNLLLDNL GDAMKKWQDK LGGYVFLVDL DNRFLTFPDQ
SKVMHTTEDS RQGEVITARQ LADANPNFAP IADSLDSINQ TLIDEAVAKD KSRYTLAARS
ILSTTNLDKI SEQESKLLSA LLLLNIDQTF NLVESHLVDT IAVPNDFVLQ QPATAFVFRM
PFTYWKMVIV KPDNDMMSVA NALSNKLIQA MLLGFIPILL LTAWVFRRYF TRPLKRMAQS
VADMGALIEQ KKYQQLSAHK LPHSNVSEIQ IISEQTNQLI DRVVENEGAL AEINVHLEKQ
VAARTQDLQQ AMDELKASQV HLVRSEKMAT LGQMVAGVAH EVNTPLGYVR SNMELVGDNL
IRFDELLQHS DQLLHALKAP TINQEQVEQL IEQTLQCCEE IKEDEVSEDL AELIKDGLYG
VDQIAELVVG LRNFSRIDES KVKDVDINDC INTSLIMARN NLKNLDVNTN LAELPLIQCN
PSQINQVLLN LFNNAAQAMP IDHKGVLQVN SSVDKAQQHI IVSVKDNGVG IQESTLAQIF
EPFFTTKKAG DGTGLGLAIT AQIIEQHAGG IEVSSSVGEG TTFTIKLPIQ SIAHKNKPPQ
ALFES