Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0646 |
Symbol | |
ID | 3514386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 766279 |
End bp | 767226 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637669336 |
Product | ribosomal large subunit pseudouridine synthase B |
Protein accession | YP_263939 |
Protein GI | 71065212 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.945317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.276422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGATG AAAAATTACA GAAAGCACTT GCCCGTATGG GACTTGGTTC ACGTCGTCAG ATGGAAGAAG TCATTAAAGC AGGTCGCGTA ACCGTCAATA ATGGTCCAGC TACCATCGGT GACCGCGTTG AGCAAGGTGA TGAGATTCGG GTTGATGGTC GTCAGATTAA ATATACTGCT GAAAATGAAA AGCGTCGCCG TGTATTAGCC TATTACAAGC CTGAAGGCGA AGTGTGCTCA GCCAATGACC CAGAAGGTCG CCCTACCGTG TTTGAGCGTC TGCCAAAACT GACTCACGAT CGCTGGGTGA TGGTTGGGCG TTTGGATATT AATTCCACAG GTCTATTATT ATTTACCAAT GATGGTGAAA TGGCGCATCG TTTGATGCAT CCGTCTAGCG AAGTAACTCG CGAATATGCA GTACGTGTAT TGGGCGATGT TACCCCAGAT ATGGCACGGG CGATGACAAC GGGTGTCATG TTAGAAGATG GCATGGCCAA ATTTGAAGAC ATCAAAGAAG GCGGCGGTGA AGGCGTCAAT AAGTGGCATC ATGTCAAGCT TAAAGAAGGT CGTAACCGTG AAGTTCGTCG TTTATTTGAG TCACAAGGCC TTAAAGTCAG CCGTCTATTA CGTACGAGCT ATGGTAATAT TGCGTTACCA AAAGAGCTAC GGACTGGGCG CTTCTTAGAG CTGGATAGAA AAGATATTAA TATTTTAACA GACCTAGTGA GCTTACGCCC GCGTTATGGT ACTGGTCTGC ATGGTGCTGC CAAAGAAAAG CAAGAGCGTA TCAGAAATAA GCCGCTTAAA GCCCGTCGTA CTGACACTCG TAGCGATAAT CGCAACAGTA CTAGTAGTAG CGCCAATAGT AGCACCAAAC CAAAAACTAG TGGTAGCCCT GCCAGTCGCG GCACCCGTAA TAGCCGTGAC CGCAACGACA AGCGCTAA
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Protein sequence | MKDEKLQKAL ARMGLGSRRQ MEEVIKAGRV TVNNGPATIG DRVEQGDEIR VDGRQIKYTA ENEKRRRVLA YYKPEGEVCS ANDPEGRPTV FERLPKLTHD RWVMVGRLDI NSTGLLLFTN DGEMAHRLMH PSSEVTREYA VRVLGDVTPD MARAMTTGVM LEDGMAKFED IKEGGGEGVN KWHHVKLKEG RNREVRRLFE SQGLKVSRLL RTSYGNIALP KELRTGRFLE LDRKDINILT DLVSLRPRYG TGLHGAAKEK QERIRNKPLK ARRTDTRSDN RNSTSSSANS STKPKTSGSP ASRGTRNSRD RNDKR
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