Gene Psyc_0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0646 
Symbol 
ID3514386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp766279 
End bp767226 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content47% 
IMG OID637669336 
Productribosomal large subunit pseudouridine synthase B 
Protein accessionYP_263939 
Protein GI71065212 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.945317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.276422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATG AAAAATTACA GAAAGCACTT GCCCGTATGG GACTTGGTTC ACGTCGTCAG 
ATGGAAGAAG TCATTAAAGC AGGTCGCGTA ACCGTCAATA ATGGTCCAGC TACCATCGGT
GACCGCGTTG AGCAAGGTGA TGAGATTCGG GTTGATGGTC GTCAGATTAA ATATACTGCT
GAAAATGAAA AGCGTCGCCG TGTATTAGCC TATTACAAGC CTGAAGGCGA AGTGTGCTCA
GCCAATGACC CAGAAGGTCG CCCTACCGTG TTTGAGCGTC TGCCAAAACT GACTCACGAT
CGCTGGGTGA TGGTTGGGCG TTTGGATATT AATTCCACAG GTCTATTATT ATTTACCAAT
GATGGTGAAA TGGCGCATCG TTTGATGCAT CCGTCTAGCG AAGTAACTCG CGAATATGCA
GTACGTGTAT TGGGCGATGT TACCCCAGAT ATGGCACGGG CGATGACAAC GGGTGTCATG
TTAGAAGATG GCATGGCCAA ATTTGAAGAC ATCAAAGAAG GCGGCGGTGA AGGCGTCAAT
AAGTGGCATC ATGTCAAGCT TAAAGAAGGT CGTAACCGTG AAGTTCGTCG TTTATTTGAG
TCACAAGGCC TTAAAGTCAG CCGTCTATTA CGTACGAGCT ATGGTAATAT TGCGTTACCA
AAAGAGCTAC GGACTGGGCG CTTCTTAGAG CTGGATAGAA AAGATATTAA TATTTTAACA
GACCTAGTGA GCTTACGCCC GCGTTATGGT ACTGGTCTGC ATGGTGCTGC CAAAGAAAAG
CAAGAGCGTA TCAGAAATAA GCCGCTTAAA GCCCGTCGTA CTGACACTCG TAGCGATAAT
CGCAACAGTA CTAGTAGTAG CGCCAATAGT AGCACCAAAC CAAAAACTAG TGGTAGCCCT
GCCAGTCGCG GCACCCGTAA TAGCCGTGAC CGCAACGACA AGCGCTAA
 
Protein sequence
MKDEKLQKAL ARMGLGSRRQ MEEVIKAGRV TVNNGPATIG DRVEQGDEIR VDGRQIKYTA 
ENEKRRRVLA YYKPEGEVCS ANDPEGRPTV FERLPKLTHD RWVMVGRLDI NSTGLLLFTN
DGEMAHRLMH PSSEVTREYA VRVLGDVTPD MARAMTTGVM LEDGMAKFED IKEGGGEGVN
KWHHVKLKEG RNREVRRLFE SQGLKVSRLL RTSYGNIALP KELRTGRFLE LDRKDINILT
DLVSLRPRYG TGLHGAAKEK QERIRNKPLK ARRTDTRSDN RNSTSSSANS STKPKTSGSP
ASRGTRNSRD RNDKR