Gene Psyc_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0604 
SymbolnarK 
ID3514401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp720320 
End bp721699 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content46% 
IMG OID637669295 
ProductMFS nitrate/nitrite transporter NarK 
Protein accessionYP_263898 
Protein GI71065171 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID[TIGR00886] nitrite extrusion protein (nitrite facilitator) 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGTA ATGACAATTT TAAAGGTGGT AAGCTCATCA CTGACTGGCG TCCTGAAATG 
GAAGAGTTTT GGGAAAGTAG CGGCAAAAAA GTCGCCCGTC GCAATTTATG GATATCTATA
CCGGCCTTAC TGCTGGCTTT TGCGGTATGG ATGGTATGGA GTGCGGTCAT CGTTCGCTTG
CCAGAGATAG GTTTTGGATT TGATAGAGGT CAGCTTTTTT GGTTGGCGGC TCTACCAGGC
CTATCAGGGG CGACACTGCG GATTTTTTAT TCTTTTATGG TGCCTATATT TGGTGGACGG
CGCTGGACAG CTATCTCCAC TGCATCGTTA TTGATTCCGG CATTATGGAT GGGGTTTGCC
GTTCAAAACC CTGATACCCC GTTCATTATA TTCGCCATTA TTGCGCTACT TTGCGGCTTC
GGCGGCGGCA ATTTTGCCTC TTCTATGTCC AATATTTCGT TCTTTTATCC AAAATCTGAA
CAAGGTACCG CACTGGGCCT CAATGCCGGT CTTGGTAATC TAGGCGTGTC CGTTATGCAG
TTTGTGGTGC CGGTGGTCAT CCTATTTGCG GCGTTCGGTA GCTTAGGCGG CGATCCGCAG
ATTTCCGGTT CAGGCCAACA GTTCTATCTA CAAAATGCGG GCTTTATTTG GATACCTTTT
ATTCTGCTAT TCTCAGTGTT AGCTTGGTTT GGAATGAATG ATATTGCTAC TTCCAAAGCC
TCCTTTAAAG ATCAATCTGT TATCTTTAAA CGTAAGCACA ACTGGATCAT GTGCATTCTT
TACATGGCAA CCTTTGGTTC ATTCATTGGT TTTTCTGCCG CGTTTCCTAT GTTGATTAAG
AACTCGTTCC CTGCCATAGA CGCCCTGAAA TTTGCCTTTT TAGGTCCCTT GGTAGGCGCG
CTTTTCCGGC CTTTAGGAGG TTGGATATCT GATAAAGTAG GCGGCGCTAG AGTCACGTTT
TGGAATTACA TTGTGATGGT GTTGGCAGTA CTGGCTGTCA TGTACTTCTT ACCCAGTGAG
AGCAATGAAG GCAGCTTTGT CGGATACTTC ATCTCCTTCA TGGTGCTATT TATTACTACC
GGCATCGGTA ACGGCTCTAC CTTTACCATG ATTCCGGTTA TTTTTAGAAC CTTTCATGAG
CGACGTGCAC CGGAGAAGGT GGGAGCAGAG TCACTGTTCG TAGAGATACG TAAAGAGTCC
GCAGCGGTGG TTGGTTTTAC CTCGGCTATC GCGGCTTATG GCGCTTTCTT TATTCCTAAA
ATGTTTGGAT CGGGCTTAGG AGTCTTTGGC ACTTTTATCG CTTTAATTAT TTTTTATATC
ATTTGTATCG TATTGACTTG GTGGTATTAC AGCCGTGGAA ACGCAGAATA TCCTTGTTAG
 
Protein sequence
MGSNDNFKGG KLITDWRPEM EEFWESSGKK VARRNLWISI PALLLAFAVW MVWSAVIVRL 
PEIGFGFDRG QLFWLAALPG LSGATLRIFY SFMVPIFGGR RWTAISTASL LIPALWMGFA
VQNPDTPFII FAIIALLCGF GGGNFASSMS NISFFYPKSE QGTALGLNAG LGNLGVSVMQ
FVVPVVILFA AFGSLGGDPQ ISGSGQQFYL QNAGFIWIPF ILLFSVLAWF GMNDIATSKA
SFKDQSVIFK RKHNWIMCIL YMATFGSFIG FSAAFPMLIK NSFPAIDALK FAFLGPLVGA
LFRPLGGWIS DKVGGARVTF WNYIVMVLAV LAVMYFLPSE SNEGSFVGYF ISFMVLFITT
GIGNGSTFTM IPVIFRTFHE RRAPEKVGAE SLFVEIRKES AAVVGFTSAI AAYGAFFIPK
MFGSGLGVFG TFIALIIFYI ICIVLTWWYY SRGNAEYPC