Gene Psyc_0577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0577 
Symbol 
ID3514465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp683738 
End bp686623 
Gene Length2886 bp 
Protein Length961 aa 
Translation table11 
GC content34% 
IMG OID637669269 
Producthypothetical protein 
Protein accessionYP_263872 
Protein GI71065145 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAA TTATTCTTAA GAAACCAGTC AACGTACTTA ACCGTAACGT CAAATTCGAT 
TTGAAGGACT TTTTTCTTCA AGCATCGTCC ACTGTAGCAG GCACTGCAAT TCAAGTCGCT
ACTGCAAATC CTGTAGGTGC GTTGACCAGT ATCGTTAAAG GCTTAGCGAG TACCTCTAAA
TCAATATACT TAGAAGAAGT TCCAGTAGAA GAGAGGGCTT GGTTGCTTGT TGTGAGTTCT
TTAACTCATG CTATCGCCAA GATATTAGAA GATTTTAATG ATTTATTTGA AAATAGTATC
GAATCTTCTC AACTGAATAC AGTTAGCGAG CAAATCACTA ACCAAATCAA TGAAGTTGAA
ATTACGCTAA CAAATGAGTT TTTTAGCAAA CCGCATAAAT TAGCATTTTT AGAAGACTTC
TCTCTTATTT TAGTTAGTTG GCTACAGCAG CTAGGATTAA ATGATAGTCA AACTAAGTCA
TTTATTTATC AGTTTAAATC TCAATTTCCG ATGTCATTAC ATTATGAATG GGGTACAAAT
TCATCTTATT ACGCCCTGAT AGTTGAGAAG CTAGATACAC CGTTTAACAC TGTCAATAGA
CTGCAAAGAC AGGCATCCGA ATATCGCTAC TGGCTCCAGC AGCAAGTTAA TGAACGTATC
TTCGAAGAAG CCTTTGGACT TAGACAAGTA TATGTACCTT TAAGAGCTTA TTACACACAA
AAAACAGATA ATGATGGTAT TAAAGTCGAT GAAAGTAACA TAGAGGCTGA AGGTAGTGAA
GTGCTTAACC TTAATAATAA AAATATCAAT AAAAAAGTCT GCAATCTGTA TGAAGAAATT
AATAAATGGC TTAATCAGAC TGATGTAGAA GATAGCTTGA AAGTTATTAG TGGTGGACCT
GGATCAGGTA AATCGTCTTT TGCTAAGATT TTAGCGGCAG AATTAGCTGA AAAATCCGAT
ATACCAGTTT TGTTTATACC TTTACATCGT TTTAAAATTA ATGGTTATCT ACCTGATGCT
ATTAGGCAGT TTCTTGACAA TCACCATATA TTAAGTCAAG AGAATCTATT AAATGAATTA
AATCTTCTTC TCATATTCGA CGGTTTGGAT GAACTGTCAA TGCAGGGTAC TAATTCAAAA
GATATAGCGA ACAATTTCAC AGAAGAATTA AAGGAAGTAT TGAGAGAAAA AAGAAGTTTA
AACTGGAAAT CCATTATCAC TGGTCGAGAG CTGTCTATCC AGCAACAGCA AAACAAGTTA
AAAAAGCAGA AGACTATTCT ACATTTATTA CCATACTTTA TTAACGAAGA TGATAGGGAT
GGTTTTGATG ATCCCAGTAA TTTGTTAGTG GAAGATCAAC GTAATGATTG GTGGCAGAAA
TTTGGTGAGC TAAAAAGTGA GGGCTTTGAT GGATTACCTG AGATACTAGC AACTGAACAT
TTGGAGCCTA TAACAAAAGA GCCTTTGCTA AATTATCTTT TATCATTGAG CTATTTGAGA
CAAGATATAA AATTTACGAC AGATACCAAC CTCAATCAGA TATATGCAGA TTTACTAGAT
TCAGTCCATG AACGGAAGTA TACGGGTAGC CGTACTCATA CTGGAATAAG CAATATTGAG
AAAGAAAACT TTATACGAAT TCTTGAGGAA ATTGCATTAG TAGTTTGGCA TGAGAATGGT
AGAACCGCTA GTATTGATAA GATCATGGAA CGATGTAAAG AGGCTGGAAT TGCAAGCTAC
TTTGAAGAAT TTAAAGGCGA TGCAGAATCA GGTGTTATTC GTCTATTAAT GGCGTTTTAC
TTTAGAGAAT TTGACGGTAG TCAAGGTGAA AAAACTTTTG AATTTACGCA TAAAAGTTTT
GGAGAGTATT TAACAGCAAA ACGGATAATG CTGGAATTAG AAATAATGCT AGAGGAAGTT
GAGCGTGGTA GAAGTCGTGC AGGCTCTGGC TGGACAGTAG AGTATGCATT TGAAAAATGG
ATAAAAATTT GCGGTGCTCA ATATATCTCC TATGAATTAA ACCGATTTAT AGATGGTGAG
TTTAAAATAA TGATGTTAAA ACAGAACGGA CTAGAAAAAA TAAAAAAATA TCAGAGTTTA
ATGATCGAAT TGATACAAAT GTCAGTAAAT GGGCAATCAC CTATAAAAAA CCTTAGTTTA
AGCTCTTTTA AAGAGGATTT AACATATAGC AATATAGCTG AAATTGATAT GTTAATAATA
CATTCACTAT GTGCCAGATA TACTAATAAT GTGATTAAAA ACGTTAAATA TAATGATGAA
AAAGCCTTTG ATAGCTGGAT ACATAGGCTA GATTATAATA TTGAAGGGCA ATTCAATCAT
CTAGATCTTA GAAAGTGTGA CTTAAGAAAT ATATTTTTAG GTTGTAATTT TGACTCCACA
ATACTAGATG ATGGTAACTC GATTTTTTCC TCTTTTTTTA TGTCAACATT TAAAAATGCA
AGTCTTAAAA ATGCCAAACT ATACGTTACT AATTTTGAAA ATGTAGACTT TGAAGGTGTA
AATTTTGAAA ACGCAAAACT TATAGAGTCT TCCTTGAAAG GTGCTAATAT AAAAAATGTG
TGTCTTTCAG GTGCTAACTT AGAAAGAACG AATTTTACTA AAGTCCAAGC TGAAGGCGCG
GACTTCATGA TTGCCAACCT TGAGGATGCT AATTTGAGTG AAGCAAATTT TACGAATACT
AATTTCGTAG GTGCTAATTT TAAAAAGGCT AATCTTAATG GCACTGATTT TACTAATTCA
AACCTTGAAA ATGCAAACTT TGAAGGCACT AACCATGAGG ATGCTATTTT CACTGGATCA
AATTTAAAAG GCACTATTCT AGAAGGTTTA TACTCATCAG AAGATAAGCT AGAGGAGACA
TTATGA
 
Protein sequence
MSEIILKKPV NVLNRNVKFD LKDFFLQASS TVAGTAIQVA TANPVGALTS IVKGLASTSK 
SIYLEEVPVE ERAWLLVVSS LTHAIAKILE DFNDLFENSI ESSQLNTVSE QITNQINEVE
ITLTNEFFSK PHKLAFLEDF SLILVSWLQQ LGLNDSQTKS FIYQFKSQFP MSLHYEWGTN
SSYYALIVEK LDTPFNTVNR LQRQASEYRY WLQQQVNERI FEEAFGLRQV YVPLRAYYTQ
KTDNDGIKVD ESNIEAEGSE VLNLNNKNIN KKVCNLYEEI NKWLNQTDVE DSLKVISGGP
GSGKSSFAKI LAAELAEKSD IPVLFIPLHR FKINGYLPDA IRQFLDNHHI LSQENLLNEL
NLLLIFDGLD ELSMQGTNSK DIANNFTEEL KEVLREKRSL NWKSIITGRE LSIQQQQNKL
KKQKTILHLL PYFINEDDRD GFDDPSNLLV EDQRNDWWQK FGELKSEGFD GLPEILATEH
LEPITKEPLL NYLLSLSYLR QDIKFTTDTN LNQIYADLLD SVHERKYTGS RTHTGISNIE
KENFIRILEE IALVVWHENG RTASIDKIME RCKEAGIASY FEEFKGDAES GVIRLLMAFY
FREFDGSQGE KTFEFTHKSF GEYLTAKRIM LELEIMLEEV ERGRSRAGSG WTVEYAFEKW
IKICGAQYIS YELNRFIDGE FKIMMLKQNG LEKIKKYQSL MIELIQMSVN GQSPIKNLSL
SSFKEDLTYS NIAEIDMLII HSLCARYTNN VIKNVKYNDE KAFDSWIHRL DYNIEGQFNH
LDLRKCDLRN IFLGCNFDST ILDDGNSIFS SFFMSTFKNA SLKNAKLYVT NFENVDFEGV
NFENAKLIES SLKGANIKNV CLSGANLERT NFTKVQAEGA DFMIANLEDA NLSEANFTNT
NFVGANFKKA NLNGTDFTNS NLENANFEGT NHEDAIFTGS NLKGTILEGL YSSEDKLEET
L