Gene Psyc_0573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0573 
SymbolmacA 
ID3514461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp677216 
End bp678583 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content47% 
IMG OID637669265 
Productmacrolide secretion protein MacA 
Protein accessionYP_263868 
Protein GI71065141 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000123833 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAA TCAGCAAAAA GCCTGCTATC AAATGGGGCA TTATTGCCTT AGTCATTATC 
GCCTTAGGCG TTTTAGCCTA TCAAACCTTA AAACCAAAAG AAGCCACACC CAACTATCTG
ACAGCGACTG CTGAGATTGG CGATATCGAA AATAACGTTA TGGCATCGGG TAAAGTTAAA
GCGCTTAATA CCGTCGATGT CGGTGCGCAA GTATCTGGTG AGGTGACACG GCTGTTCGTT
GAAGTCGGTG ATGAAGTGCA AAAAGGCGAT TTAATTGCGC AGATTGACCA AGTGACGCAA
AAGAATAATT TGAGCAATGA GCAAGCCAGC CTTGAACAAA GCGAAGCGGG TTTACAAAGC
GCACGAGCTG AGTCGTTAAG TCGTCAAGCA GGTCTCAAAA GTGCGCAAGC GGATCTTGCC
AGCCGTCAAG CTGAGTTAAG ACAAGCGCAA GCAGACTTTT CACGCTTGCA AGGTTTACTC
GCTATCGATG CGATATCACA GCAAGATTAT GATACACAAG GGACAAAGGT ACAAACCGCG
CAGGCAGCAG TCGCCAATGC ACGTGCCTCT ATCGACACGG CCAAAGCCGC TATTGCCACT
ACTGCAGCGA ATATTAACAG TCAGCAGGCG GCGTTACGTA AATCTCAGAC CAACGTCAGT
ACTGCGCAGG AAGATTTAAG CTACACTACC ATTCGTGCAC CGATGTCAGG CACCGTGGTA
TCTGTAACCA CTGAGCAAGG GACGACGGTC AACGCCAATC AAACCGCGCC AACTATTGTC
ACATTAGCTG ATTTATCTAC CGTTCGCATC AATGCCCAAA TCTCTGAAGC CGACGTCATT
AACGTTAAAG CAGGCTTGCC AGTCTATTTT AATATCATCG GTAATCCTGA TCAAAAATAT
GATTCGATCC TTAAAGCGAT TGAACCGGCT CCTGAAAAAA TCAGCGATAC CAGCTCGACC
GATGCTGCCA TTTATTATGT CGGTTATATC GAAGTGCCCA ATATCGAGCG CCGCTTTCGT
ATCGATATGA CCGCGCAAGT TTATATCGTT ATTAATCAAG CAAAAGACGC GCTACTTATT
CCATCTGCCG CACTGCAACC TGCCGGTCAA TCTAAAAAAT CTGGAAATGA TAAAACAGCG
TCTGCCACTT CAGCTAATCC TCATGGCGAT TTTGGCACAA CTATGGCGAA TGTTCGCGTT
CTTAAAGCTG ATGGCACAGT GGTTGAACAA GCGGTCAAAG TCGGTATCAA TAATCGCGTC
AATGCTGAGA TATTGAGCGG TCTCAAAAAA GGTGATGAGG TTATCTTAAG CGAAGAAGGA
CCAGATAGTG GCAGTAAAGG CGGTGGCAGA GGCGGTCGAC CGTTCTAG
 
Protein sequence
MRKISKKPAI KWGIIALVII ALGVLAYQTL KPKEATPNYL TATAEIGDIE NNVMASGKVK 
ALNTVDVGAQ VSGEVTRLFV EVGDEVQKGD LIAQIDQVTQ KNNLSNEQAS LEQSEAGLQS
ARAESLSRQA GLKSAQADLA SRQAELRQAQ ADFSRLQGLL AIDAISQQDY DTQGTKVQTA
QAAVANARAS IDTAKAAIAT TAANINSQQA ALRKSQTNVS TAQEDLSYTT IRAPMSGTVV
SVTTEQGTTV NANQTAPTIV TLADLSTVRI NAQISEADVI NVKAGLPVYF NIIGNPDQKY
DSILKAIEPA PEKISDTSST DAAIYYVGYI EVPNIERRFR IDMTAQVYIV INQAKDALLI
PSAALQPAGQ SKKSGNDKTA SATSANPHGD FGTTMANVRV LKADGTVVEQ AVKVGINNRV
NAEILSGLKK GDEVILSEEG PDSGSKGGGR GGRPF