Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0506 |
Symbol | rpsE |
ID | 3514305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 603895 |
End bp | 604410 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637669193 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_263803 |
Protein GI | 71065076 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00232131 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00336065 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTAGAA ATGATAAAAA TGATAAAAAT GAACAGACTG ACGGTCTAGT CGAACGCTTA GTTACCGTTG ATCGCGTTGC AAAAGTTGTT AAAGGTGGTC GTATTTTCTC TTTCACTGCG TTGACCGTAG TGGGTGATGG CAATGGCCGT GTTGGTTTTG GTCGTGGTAA AGCACGTGAA GTGCCAGCTG CTATTCAAAA AGCACTAGAA GCTGCCAAAC GTAATATGAT TACTGTTGAG CTAAATGATG CAACTTTGTA TCATCCGATC AAAGCACGTC ATGGTGCTAG TAAAGTCTAT ATGCAACCTG CATCTGAAGG TACTGGCGTA ATCGCTGGTG GCGCAATGCG TGCTGTATTA GAAGTTGCTG GTGTCAAAGA TGTTTTGACT AAATGTTATG GTTCTACCAA CACTGCTAAC GTTGTTCGTG CAACGTTTAA CGGTTTACGT GATATGTCAA CTCCAGAAAA GATGGCAGCG AAACGTGGTA AATCTGTAGA CGAAATCTTG GGTTAA
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Protein sequence | MARNDKNDKN EQTDGLVERL VTVDRVAKVV KGGRIFSFTA LTVVGDGNGR VGFGRGKARE VPAAIQKALE AAKRNMITVE LNDATLYHPI KARHGASKVY MQPASEGTGV IAGGAMRAVL EVAGVKDVLT KCYGSTNTAN VVRATFNGLR DMSTPEKMAA KRGKSVDEIL G
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