Gene Psyc_0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0506 
SymbolrpsE 
ID3514305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp603895 
End bp604410 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content43% 
IMG OID637669193 
Product30S ribosomal protein S5 
Protein accessionYP_263803 
Protein GI71065076 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00232131 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00336065 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTAGAA ATGATAAAAA TGATAAAAAT GAACAGACTG ACGGTCTAGT CGAACGCTTA 
GTTACCGTTG ATCGCGTTGC AAAAGTTGTT AAAGGTGGTC GTATTTTCTC TTTCACTGCG
TTGACCGTAG TGGGTGATGG CAATGGCCGT GTTGGTTTTG GTCGTGGTAA AGCACGTGAA
GTGCCAGCTG CTATTCAAAA AGCACTAGAA GCTGCCAAAC GTAATATGAT TACTGTTGAG
CTAAATGATG CAACTTTGTA TCATCCGATC AAAGCACGTC ATGGTGCTAG TAAAGTCTAT
ATGCAACCTG CATCTGAAGG TACTGGCGTA ATCGCTGGTG GCGCAATGCG TGCTGTATTA
GAAGTTGCTG GTGTCAAAGA TGTTTTGACT AAATGTTATG GTTCTACCAA CACTGCTAAC
GTTGTTCGTG CAACGTTTAA CGGTTTACGT GATATGTCAA CTCCAGAAAA GATGGCAGCG
AAACGTGGTA AATCTGTAGA CGAAATCTTG GGTTAA
 
Protein sequence
MARNDKNDKN EQTDGLVERL VTVDRVAKVV KGGRIFSFTA LTVVGDGNGR VGFGRGKARE 
VPAAIQKALE AAKRNMITVE LNDATLYHPI KARHGASKVY MQPASEGTGV IAGGAMRAVL
EVAGVKDVLT KCYGSTNTAN VVRATFNGLR DMSTPEKMAA KRGKSVDEIL G