| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0480 |
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| Symbol | gatB |
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| ID | 3514433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 585580 |
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| End bp | 587109 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637669167 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_263777 |
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| Protein GI | 71065050 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.133346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.186323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAG CACCTACTAC TGACAACAAT GCCGTTCGCA AACACGATGT TCGTCCAGAG
CTATTCGTTG ATGGTTATGA AGTGGTCATC GGTATCGAGA TTCACTGCCA GCTTAATACT
GAAAGTAAGA TATTCTCTAG CGCACCGACT GACTTTGGTC ACGAACCAAA CACCCAAGCC
AGTATCGTTG ACTTGGGTTT GCCGGGTGTC TTGCCAGTAC TAAATGCTGG TGTGGTCGAT
CGTGCGCTAA AATTCGGTAT CGGTGTTAAC GCTGAGCTTG GTTTATTCAA TACTTTTGAC
CGCAAAAACT ATTTTTACCC TGATTTGCCA AAAGGCTATC AAATCACCCA GATGGCAAAC
CCTATCGTTG GCGAGGGTTA TATTGATGTC GTTGTCAATG AAGGTGAAAA GAACGAATAC
CCTAAACGCA TGGGGATTAC CCGCGCGCAT CTAGAAGAAG ATGCTGGAAA ATCCGTTCAT
GATGCCGTCG ATGGTATGAC TGGCGTCGAT TTAAACCGTG CTGGTACGCC GCTGATTGAA
ATTGTCTCTG AGCCTGATAT GCGCTCAGCT CATGAAGCGC TTGCTTATAT CAAAGCCATT
CATCAGCTGG TGACTTGGCT AGGCATCTCA GATGCCATCA TGGCAGAAGG CTCATTCCGC
TGTGATTGTA ACGTCTCTAT TCGTAAGCCT GGTGCAGAAT TGGGGACTCG TACTGAGCTG
AAGAATTTAA ACTCATTTCG CTTTATCGAG CGTGCTATTA ATCGTGAAAT CGAACGTCAA
ATCGATATCT TAGAGGATGG TGGCAAGGTC GTGCAAGCAA CGATGCTTTA TGATCCCGAG
CGCGATGAAA CTCGTGTTAT GCGTACTAAA GAAGACGCCA ACGACTATCG CTATTTCCCT
GATCCTGACT TGCTACCTGT GCGCATTGAG CAGCTCACGG TTGATAGCAT TCGTGCAGCG
ATGCCAGAGC TACCGGTTGC CCGTCGCGCG CGTTTTGAAG AGGCGCTTGG TCTCTCGGAA
TATGACGCTC GTATCTTGAC TGGTAGTCGT CAAATTGCTG ATTACTTTGA AGATGTCGTT
GCTGAGATTG ATCAGCAAGA TGCTAAGATG GCTGCTAACT GGGTCATGGG CGACCTACTT
GGTGCACTGA ATAAAGATGA CAAAGATATC ATCGACTCCC CTATCAGCGC CAAGCAATTG
GCTGGCATGC TAGCACGTAT TAAAGACGAT ACCTTATCTG GTAAATTGGC TAAAAAAGTA
TTTGGCGCCT TGTATGAACG CGCGGGCGGC GATGCTGATG ACGCGGCAGA TAAAATCATC
GAAGAAAAAG GTCTTAAGCA AGAAACCGAT ACAGGTGCTA TCAAAGCCAT CGTTGAAGAG
GTCATTGCTA AGAATACAGC AATGGTTGAA GAGTATCGCG GCGGCAAAGA AAAAGCCTTT
AACGGCCTGG TTGGTCAAGT CATGAAAGCC AGTCGCGGTA GTGCTAACCC GCAGCAAGTC
AACCAAATCC TAAAAGAGCT TTTGGATTAA
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| Protein sequence | MNTAPTTDNN AVRKHDVRPE LFVDGYEVVI GIEIHCQLNT ESKIFSSAPT DFGHEPNTQA
SIVDLGLPGV LPVLNAGVVD RALKFGIGVN AELGLFNTFD RKNYFYPDLP KGYQITQMAN
PIVGEGYIDV VVNEGEKNEY PKRMGITRAH LEEDAGKSVH DAVDGMTGVD LNRAGTPLIE
IVSEPDMRSA HEALAYIKAI HQLVTWLGIS DAIMAEGSFR CDCNVSIRKP GAELGTRTEL
KNLNSFRFIE RAINREIERQ IDILEDGGKV VQATMLYDPE RDETRVMRTK EDANDYRYFP
DPDLLPVRIE QLTVDSIRAA MPELPVARRA RFEEALGLSE YDARILTGSR QIADYFEDVV
AEIDQQDAKM AANWVMGDLL GALNKDDKDI IDSPISAKQL AGMLARIKDD TLSGKLAKKV
FGALYERAGG DADDAADKII EEKGLKQETD TGAIKAIVEE VIAKNTAMVE EYRGGKEKAF
NGLVGQVMKA SRGSANPQQV NQILKELLD
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