Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0433 |
Symbol | trpA |
ID | 3514231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 542793 |
End bp | 543629 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637669119 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_263730 |
Protein GI | 71065003 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGTA TTGAAAGCAC TTTTGAAATT TTAAAAGCAC AAAATAAAAA AGCACTCATC CCTTATGTGA TGGCAGGCGA CCCTAATCCT AGCAACTTTG TTGGCTTGCT ACATGATTTA GTCAAGCACG GCGCAGATAT GATTGAAGTG GGCTTGCCAT TTTCTGACCC AATGGCAGAC GGTCCAACCG TTGCACTGGC AGGCGAGCGT GCATTAGCAG CGGGCACCAG TACTCGTGAT GCGCTAAAGA TGGTCGCAGA GTTTCGTCAG CAAGACACGC AGACGCCCAT CATTTTGATG GGTTATCTGA ATCCCGTTGA AATCATCGGT TATGATAACT TCGTTGCGCT ATGCGAGCAG TCAGGGGTTG ATGGCATCTT AATGGTTGAT TTGCCACCAG CAGAGGCGGG TAGCTTTACT CAGCATTTGA CTGAGCACTC GATGAATGAG ATTTTCTTAC TCTCACCGAC TACCTTACCT GAGCGCCGTG AGCAAGTATT GACCCATTGC GGTGGTTATA TCTACTACGT GTCTTTGAAA GGTGTCACGG GTTCGGCAAC GCTAGATACT GACGATGTCG CAACCCAAGT GCAAGCCATT AAAGCAGAGA CGGATTTGCC AGTATGTGTG GGTTTTGGTA TTCGTGATGC GGCGTCAGCC AAAGCAATCG GTGCTCATGC TGATGGCATT ATCGTCGGTA GTGCATTGGT GCAGAACTTT GCTGATATCG ATGGTAATGA TGCCACGGCT GTTGCACATG CACAACAAAA AATCATGGCA AAAATGACTG AGCTACGCGA GGCATTAGAT AGTTTAAGCG TTTCTTCAAA TGGCTAA
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Protein sequence | MTRIESTFEI LKAQNKKALI PYVMAGDPNP SNFVGLLHDL VKHGADMIEV GLPFSDPMAD GPTVALAGER ALAAGTSTRD ALKMVAEFRQ QDTQTPIILM GYLNPVEIIG YDNFVALCEQ SGVDGILMVD LPPAEAGSFT QHLTEHSMNE IFLLSPTTLP ERREQVLTHC GGYIYYVSLK GVTGSATLDT DDVATQVQAI KAETDLPVCV GFGIRDAASA KAIGAHADGI IVGSALVQNF ADIDGNDATA VAHAQQKIMA KMTELREALD SLSVSSNG
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