Gene Psyc_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0404 
Symbol 
ID3514142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp508533 
End bp509117 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content43% 
IMG OID637669093 
Producthypothetical protein 
Protein accessionYP_263705 
Protein GI71064978 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000383864 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATAA TCAAAATCGC TGCTATCGGT ACTTTAGCTG TTTCACTTGC AGGTCTAAGT 
GCTTGTAATA ATATGATGCC AGCCAAAAGC GCTTCTATGA AAGCGCCAAT GCATAGCCAA
TCGATGCATA GTCCATCGAT GCATAGCCAA TCAATGGCAA AAATGAATGT AGTACAAATC
GCTCAAAGCA ATCCTGATTT CTCTGTACTC GTAGAAGCCG TCGTCGCCGC TGATTTAGCG
GGTGTGCTCT CTAATCCTAA TGCTAACTAT ACGATTCTTG CGCCAACCAA TGCCGCATTT
ATGCAAGCGC TACAAGAAAC GGGTATGAGT AAAGCACAGC TTTTTGCCAA TAAACCACTA
TTGACCAAAA TCTTAAGCTA TCACGTGATC AATGCCGCAG CACCTATTTA TGCCAAGGAT
GTCAGACCAG GCAATGTAAC CATGCTAAGC ACAGACACGC TTATGGTGAC TGCCCAAGGC
AAATTGATGG ATGAAAGTGG ACGTACGGCA AATCTCTTAA AAACCGACAT TACTGCCAGT
AATGGCGTGA TACATGTGAT TGATAGGGTT CTTATGCCTA GATAG
 
Protein sequence
MKIIKIAAIG TLAVSLAGLS ACNNMMPAKS ASMKAPMHSQ SMHSPSMHSQ SMAKMNVVQI 
AQSNPDFSVL VEAVVAADLA GVLSNPNANY TILAPTNAAF MQALQETGMS KAQLFANKPL
LTKILSYHVI NAAAPIYAKD VRPGNVTMLS TDTLMVTAQG KLMDESGRTA NLLKTDITAS
NGVIHVIDRV LMPR