| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0393 |
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| Symbol | |
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| ID | 3513997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 492825 |
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| End bp | 494051 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637669083 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_263695 |
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| Protein GI | 71064968 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00205919 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCACA ACTTGACGAC CCTACACCCT TATCCATTCG CTAAGATGGC CACTTTGCTT
GCTGATAGTA CCCCAGCCCA TAGCTATGAT GAAATTAAAC TGGGTATTGG TGAGCCAAAA
CATGCGCCGC CAGCATTTGT TCTGGACGTA CTACGCGAAA ACTTGGACAA AATAAGTCAT
TATCCCACTA CAAATGGGCT ATTTGAGCTG CGTCAAACCA TTGCCCATTG GCTTGAGAAG
CGTTTTTTCC TAAATCACGT CAATCCTAAT ACGCAAGTAT TGCCAGTAAT GGGCACGCGT
GAGGCGATAT TTAGTATCGT ACAGGCAGTG ATTAATCATC AGACAGAGAC TATTAGTCAG
ACGGCAACGC TCAACCAATC GCCCGTTGTT GTCATGCCCA ATCCGTTTTA TCAGATATAT
GAAGGGGCAG CGATATTAGC ACAAGCAACG CCTTATTTTA TCCCTTGCAC TGCAGACAAC
GGCTTTAAAG GAGATTTTCG CAGCGTTCCA AAAGACGTAT GGATGCGTAC ACAGCTATTA
TTTGTCTGTA GCCCAAATAA TCCAACAGGC TCGGTGATGA CGATGGATGA CTGGGAGCAA
CTCTTGCGCC TGTCAGACCA ATACGGCTTT ATCATCGCCA GCGACGAGTG TTATAGCGAG
CTGTACTTTG ATAAAGCGCC AATAGGACTA TTACAAGCCT GCGCTGCCCT TGGTCGCCAT
GATTTCAAAA ACTGTCTGGT GTTCCATTCT TTATCGAAAC GCTCAAACCT GCCCGGTTTG
CGTTCAGGCT TTGTGGCAGG TGACGCCACT ATTTTGGACT CTTATCTGCA GTACCGCACC
TATCAAGGCT GCGCGATGCC AATACCTCAT CAGCTGGCGT CTATCGCCGC TTGGGAAGAT
GAAAAACATG TGGCGCACAA TCGAGCGCTG TATCAAGAAA AATTCGCTTT ATGGATGTCG
GAGCTTGGTG CGTTATTAGA TTTACGTATG CCTGAAGCAG GGTTTTACTT CTGGATAAAA
GCGCCTGAGC AGTTCGATGG TGATGATGAG CTTTTCGTCA AAGCGCTCTA TGAGCACGCC
AATATCCATG CACTAGCAGG GCGTTACTTG TCACGCGAGG TCAATGGCAA AAATCCGGGG
CAAGGCTATG TACGTATTGC TTTGGTGGCA AGCGTCGAGG AAAGTCGTGA GGCAATCAGG
CGCATTCGTC AATTACTCGG TGCTTAA
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| Protein sequence | MNHNLTTLHP YPFAKMATLL ADSTPAHSYD EIKLGIGEPK HAPPAFVLDV LRENLDKISH
YPTTNGLFEL RQTIAHWLEK RFFLNHVNPN TQVLPVMGTR EAIFSIVQAV INHQTETISQ
TATLNQSPVV VMPNPFYQIY EGAAILAQAT PYFIPCTADN GFKGDFRSVP KDVWMRTQLL
FVCSPNNPTG SVMTMDDWEQ LLRLSDQYGF IIASDECYSE LYFDKAPIGL LQACAALGRH
DFKNCLVFHS LSKRSNLPGL RSGFVAGDAT ILDSYLQYRT YQGCAMPIPH QLASIAAWED
EKHVAHNRAL YQEKFALWMS ELGALLDLRM PEAGFYFWIK APEQFDGDDE LFVKALYEHA
NIHALAGRYL SREVNGKNPG QGYVRIALVA SVEESREAIR RIRQLLGA
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