Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0339 |
Symbol | |
ID | 3515056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 419133 |
End bp | 420980 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637669026 |
Product | putative regulatory protein TypA or elongation factor Tu |
Protein accession | YP_263642 |
Protein GI | 71064915 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.597633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAACG ATATCAAACA CCTGCGTAAC ATTGCAATTA TTGCCCACGT TGACCACGGT AAAACTACTT TGGTTGATAA GCTATTACAT CAGTCTGGTA CTTTTGGTGA CCGTGCCAAC ATTGCTGAGC GTGCAATGGA TTCAGGTGAT ATTGAGCAAG AACGTGGTAT TACTATTCTG GCTAAAAATA CAGCCATTCG TTGGACAGAT AACACTGACG GTACAGAATA CCGTATCAAC ATTGTTGATA CCCCAGGTCA CGCCGACTTT GGTGGTGAAG TTGAACGTGT AATGTCTATG GTTGACTGCG TACTTCTAGT CGTTGATGCG GTTGATGGTC CAATGCCTCA GACCCGTTTT GTGACTCAAA AAGCGTTCGA GCAAGGTCTA AAACCTATCG TTGTCATCAA TAAAATTGAC CGTCCTGGCT CACGTCCTGA TTGGGTAATG GATCAAATCT TTGATTTGTT TGATAACCTT GGTGCGACTG ATGAGCAGTT AGATTTCCCA GTGGTATATG CCTCAGCATT GAATGGTATT GCTGGTCTAG AAGCTGATAA CTTAGCTGAT GACATGACGC CACTTTTCAA AACTATTGTT GATGTGGTTC AGCCTCCTCA AGTGGATGCT GAAGCACCTT TCCGTATGCA AATCTCAAGC CTTGATTACA ACAGCTTCGT TGGTGTTATC GGTATTGGTC GTATTCAGCG CGGTAAAGTA AAAACCAATA CACAAGTGAC TGTCATTGAT AAAAATGGCA ATACTCGTAA TGGCCGTATT TTGAAAATTA TGGGTTATCA TGGTCTTGAT CGTATTGATG TAGAAGATGC GCAAGCAGGC GATATCGTTT GTATTACTGG TATTGATGCA CTAAATATCT CTGATACGAT TTGTGATCCT AGCACTGTCG AAGCATTAAA GCCTTTGACG GTTGATGAAC CTACTGTTTC AATGAACTTC CAAGTAAATA ACTCACCTTT TGCTGGTCGT GACGGCAAAT TTGTGACCTC GCGTAACATT CGTGAACGTC TTGAGCGTGA ATTGATTCAT AACGTCGCAT TACGTGTAGA AGATACAGAG TCTCCTGATA AATTCAAAGT ATCAGGTCGC GGTGAGCTTC ATCTATCTGT ACTTATCGAA AACATGCGCC GTGAAGGTTT TGAGATGGGT GTTTCAGGCC CAGAAGTTAT TGTTAAAGAA GTTGATGGTA AGCTACAAGA GCCGTATGAA AACGTGGTCT TCGATATTGA AGATGAGCAT CAAGGTTCTA TCATGGAGCA GATTGGCTTG CGTAAAGGCG AGATGACCAA TATGGAACTT GATGGTAAAG GTCGTATGCG TATTGAAGCG ACTATGCCTG CCCGTGGTTT GATTGGTTTC CGCTCTGAGT TCTTAACCTT GACTTCAGGT TCAGGGATCA TGACGTCAAG CTTCTCACAT TACGGTCCAC AAAAGATTGG TGATGTTGGT GGTCGCTCGA ATGGTGTGTT GGTTTCTATG GCGAAGGGTG TTTGCCTAGG TTTTGCTCTA TTTAACCTAC AAAAACGCGG TAAATTATTC GCTGAGCCAC AGCTTGAAGT TTACGAAGGT ATGATCGTTG GTCTTAACTC ACGTAACGAT GACATGGCCG TTAACCCGAC GACTGCTAAG CAGTTAACCA ACGTCCGTGC TAGTGGTACT GATGAAGCGC TAACACTAAC GCCAGCAGTC AAGTTTACGC TTGAGCAAGC ACTAGAATTC ATCCAAGATG ATGAATTGGT AGAAGTAACG CCAAAAGCGA TTCGTCTACG TAAGCGCTAT TTGACTGAAA GTGAACGTAA GCGTTATGGT CGTAAGAAAG GTGCTTAA
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Protein sequence | MANDIKHLRN IAIIAHVDHG KTTLVDKLLH QSGTFGDRAN IAERAMDSGD IEQERGITIL AKNTAIRWTD NTDGTEYRIN IVDTPGHADF GGEVERVMSM VDCVLLVVDA VDGPMPQTRF VTQKAFEQGL KPIVVINKID RPGSRPDWVM DQIFDLFDNL GATDEQLDFP VVYASALNGI AGLEADNLAD DMTPLFKTIV DVVQPPQVDA EAPFRMQISS LDYNSFVGVI GIGRIQRGKV KTNTQVTVID KNGNTRNGRI LKIMGYHGLD RIDVEDAQAG DIVCITGIDA LNISDTICDP STVEALKPLT VDEPTVSMNF QVNNSPFAGR DGKFVTSRNI RERLERELIH NVALRVEDTE SPDKFKVSGR GELHLSVLIE NMRREGFEMG VSGPEVIVKE VDGKLQEPYE NVVFDIEDEH QGSIMEQIGL RKGEMTNMEL DGKGRMRIEA TMPARGLIGF RSEFLTLTSG SGIMTSSFSH YGPQKIGDVG GRSNGVLVSM AKGVCLGFAL FNLQKRGKLF AEPQLEVYEG MIVGLNSRND DMAVNPTTAK QLTNVRASGT DEALTLTPAV KFTLEQALEF IQDDELVEVT PKAIRLRKRY LTESERKRYG RKKGA
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