Gene Psyc_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0311 
Symbol 
ID3515115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp382457 
End bp384577 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content48% 
IMG OID637668998 
Product3-methylcrotonoyl-CoA carboxylase, alpha subunit 
Protein accessionYP_263615 
Protein GI71064888 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCTA AAATTTTGAT CGCCAACCGT GGTGAAATTG CCTGCCGAGT GGCCGCGACT 
GCCAAGCGTT TGGGTGTGAG TACCGTCGCG GTTTATTCTG ATGCTGACCG TGAAGCCAAG
CACGTGGCTG TCTGCGATGA AGCAGTTTAT TTGGGTGGTT CGGCTCCTAA AGACAGCTAT
CTAAAAGGCG ATGCTATCAT TGCGATTGCC AAAGAGACTG GCGCACAAGC GATTCACCCA
GGTTATGGAT TTTTAAGTGA AAATGCAGAT TTTGCCCAAG CTTGCCAAGA TGCAGGATTG
GTCTTTATCG GTCCATCGGC TGATGCTATC CGCGCCATGG GCGGTAAATC CGAGTCAAAG
CGCTTAATGG AAGCAGCTGG CGTGCCATTG ATACCCGGCT ATCACGGTGA AAATCAAGAT
GCCCAGTTTT TACAACAGCA AGCAGACAGC ATTGGTTATC CTGTATTGAT TAAAGCCAGT
GCTGGTGGTG GCGGTAAAGG CATGCGTATC GTTGAGCAGC CCAGTGACTT TATTGATTTA
TTAGAATCAT GCCGCCGTGA AGCGATTACC AGCTTTGGTA ACGATCAAGT ATTGGTCGAA
AAATACGCCC TAAAACCACG CCATATCGAA ATTCAAGTAT TCGGTGATAC GCATGGCAAT
TACGTCCATC TGTTTGAGCG AGATTGTTCA GTACAGCGTC GCCATCAAAA GGTATTAGAA
GAAGCGCCAG CGCCAGGTGT TGATACTGCG ATGCGTGAGG CGATGGGAAC CGCTGCAATC
GAAGCGGCGC GTGCGGTCAA TTATTTTGGT GCAGGTACGG TTGAATTTAT CGTTGAGCAG
CGCGAAGGCT CGATGAACTT TTATTTTATG GAGATGAATA CCCGTCTGCA AGTTGAGCAT
CCGGTCAGTG AAGCCATCTC TGGCGTAGAC TTGGTGGAAT GGCAGCTGCT AGTAGCGGCA
GGTTTGCCAT TGCCGAAAAA ACAGGAAGAG CTCGCGATAA ACGGACATGC GATTGAAGCA
CGTATTTGTG CTGAAAATCC TGACAATGGG TTTTTACCAG CGACGGGTAC TTTATTTATT
TACCAAAAGC CTGAGCATAG CACCTTTATC ATTAACAAGA ACAGCGCAGA TGTACGTATT
GACGATGGCG TACGCGAAGG CGATGTCATC AGTCCGTTCT ATGATTCTAT GATTGCAAAA
CTCATTGTGC ATGCACCAAC GCGAGAGCAG GCGTTAGCCA AGCTTGATCG TGCACTCGCT
CAAACGCGCA TTGTAGGTCT GCCTAATAAT GTGGCATTTT TGCGCTATAT TCTTAATACC
GAGTCGTTTA GCCAAGCCAA TCTTGATACA GCGCTGATTG AGCGTGAGCG TGAGCAGCTG
TTTCATCAGC ATCCGCTTGA GTTATCAACG CTCGTGGTTA CTGCTATTAC GCAGCAACTT
GCTAGTGAGG CGGCACTATA TGGGTCAGAT GCTGATCCCT TTAGCAAGCC TACGGGTTTC
CGTGCCTTTA GCGATTATAC ACGTTCGTTT AGCTTGGTTT GTGCAGAGCA GCCTTATCGT
GCCCGTATCA GTAACTGGCA CAATGCAGGT TGTTCAGATA ACAAAAAGGG TGCTGAAAAG
CTCAGTAGCT TTACGCTTGT CATTGAACAA GAAGTCGCCA ATACGGACAC TCAAGATAAT
ATTAATGTTG CGGCGCAAAC GTCGACAGTC TATGAGGGTC AAGTCAGCTA TAGCAGCATT
GACGCACACA ACCATATATT GTGGTTGGAA GGTGCCCGTA TCAACGCCCA AAGCTGGACA
AACCATGAGA CCGTCTATGT GTTTACTGAT AACGGACGAG ATGAGATTAC GCTTGTTGAT
ATCATGGCGC ACGTCGGCGA AGAGAATGCA GCGGTCGGTA GCTTAAAGTC GCCAATGCCA
GGTCAAGTCG TTGCCTTTAA AGTAGCAGTC GGTGATACCG TGAAAAAAGG CGAGCCATTA
GCTGTCATCG AAGCGATGAA AATCGAACAT ACCATTACTG CACCGACAGA TGGCGTGGTT
GCAGAATTAT TATTTGCTGC GGGTGATTTG GTTGCCGATG GTGATGAGCT ATTGCGTATT
GACAATGAAG ACAGTAAGTA A
 
Protein sequence
MFSKILIANR GEIACRVAAT AKRLGVSTVA VYSDADREAK HVAVCDEAVY LGGSAPKDSY 
LKGDAIIAIA KETGAQAIHP GYGFLSENAD FAQACQDAGL VFIGPSADAI RAMGGKSESK
RLMEAAGVPL IPGYHGENQD AQFLQQQADS IGYPVLIKAS AGGGGKGMRI VEQPSDFIDL
LESCRREAIT SFGNDQVLVE KYALKPRHIE IQVFGDTHGN YVHLFERDCS VQRRHQKVLE
EAPAPGVDTA MREAMGTAAI EAARAVNYFG AGTVEFIVEQ REGSMNFYFM EMNTRLQVEH
PVSEAISGVD LVEWQLLVAA GLPLPKKQEE LAINGHAIEA RICAENPDNG FLPATGTLFI
YQKPEHSTFI INKNSADVRI DDGVREGDVI SPFYDSMIAK LIVHAPTREQ ALAKLDRALA
QTRIVGLPNN VAFLRYILNT ESFSQANLDT ALIEREREQL FHQHPLELST LVVTAITQQL
ASEAALYGSD ADPFSKPTGF RAFSDYTRSF SLVCAEQPYR ARISNWHNAG CSDNKKGAEK
LSSFTLVIEQ EVANTDTQDN INVAAQTSTV YEGQVSYSSI DAHNHILWLE GARINAQSWT
NHETVYVFTD NGRDEITLVD IMAHVGEENA AVGSLKSPMP GQVVAFKVAV GDTVKKGEPL
AVIEAMKIEH TITAPTDGVV AELLFAAGDL VADGDELLRI DNEDSK