Gene Psyc_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0280 
Symbol 
ID3514174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp338964 
End bp340565 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content47% 
IMG OID637668967 
ProductOmpA family outer membrane protein 
Protein accessionYP_263584 
Protein GI71064857 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTA TCAGTCATTT GACACGGACA GTCAGTCCAG CAGTACTTGG AGACGATCAC 
AATCCCGCCA AGAAGAATTT GCTTGAACAG TTTTATGCTA TTTTTGCGGC GCGTCTAGCA
GACAATCAGA CCCATGACCG TTTTGCCAAT GAAACGATTG CTCGCGATGA CCAAGGTTTT
TATGATCGTG TATGGACAGA AGATGCGCGT CGTGATCAAA TTGCCCGTGA GCTTGCTGGT
AAGCACAACG TCGATGTGGT GGCTGCTCGT GGCTTAATTG CCATGGCAGC GCCGCTTGCT
TATCATGAAA TCAAAAGTTT GTCAGGCACG ACTCCTGTAC CTCAATTTTT AAACGAAAAT
ATTGACAGTT ATCAGCGTCA TATCCCTGTA TGGGCAACGG CTGTATTGCC TGTTGGCGTG
ATTGCTGCTG CCCCTGTTTC TACTGGAGCG CATATATCAG ATACGGTAAG CACAGCGCCG
CTACAGCACG AAGCAGAAAA AGATGGTAGC TTTATGAAAG CGCTATTACC CATTATTGGA
CTGATTATTT TAGGTGCTTT GGCGTGGGCA CTATTAAGAG GCTGCCAAGA CAAGCCTGAG
CCGGTCGGCA TGCCAATTGT GACAGCGCAG CAAGCAGCGA ATAGTGATGG ACAGGCGGTT
GCGGCTAATA TGGCACCAGC ATCATTGCGT ATTACCACTG GTGAAAATAG TGAGCTATAT
GCTTGCCGTA TGGATGTGGG TAATGACACG CTACAGAGCA ATGTTATGAC GGCACTGACT
AGCGTGTTTG GTGATGCCGC TAATAATTGC CGAGCAGATA TCGATGATAA TTTCTCAATT
GATATGCCAG CGACTGCGCA GCTTGCCACT ATTTTGTCTA TTTTTAAAAA CGTCCCAAAT
GCTAGTATGT TGGTTAAAGG CGATACGATT ACAGTCAATG CTGCTGACAC TGCCGCTTTA
AATAAATTGG TATCTGATTT ACAAGCTGCT GCGCCAGCGA TGACGGTTAT TGCTGAAGGT
CCGCTCAATG AGCAAACTGA AATTGCTGAC AGCTTAACAG CGTCTGAGGC AGCAATGGAT
AACTTGGGTC AAAACCCAGA TCCTCGTGAT GTAGCTCGCG CCTTAAGTCT ACAAGTGGTC
AATTTTGAAG TAGATAAAGC GTTGATTCCT GACGCCAACA AAGCGCTATT GGACCGTGCT
GTGAAGCTGA TGGAACAGGT GCCCAATATG ACACTGATGA TTATTGGCCA TACCGACAAA
ACAGCGGATG CTGCCTATAA TCTAAAGCTA TCAGAAGAGC GTGCTCAGGC AATGAAGGCA
TATTTGGTCG CACAAGGTGC TGATCCCAGT AAGCTTATGA CCAAAGGTAT GGGTGAGACC
GATCCTATAG CGGACAATAC GACAGACCAA GGTCGTTTCC GTAACCGCCG TATCGAGTTT
GTGGTCTATG ACGAAACGAC TACGGCCAAT GATGGCTTAG CAATTAGTAA TGACGCGCTT
GACCCAGATC TAAATCCATT AGACAGCGAT AACGATGATT TGATGCCAGA CGCTGATGAT
GCAAGCCGTG GTACTGCATT GGATTCAGCT GCCAACAACT AA
 
Protein sequence
MDIISHLTRT VSPAVLGDDH NPAKKNLLEQ FYAIFAARLA DNQTHDRFAN ETIARDDQGF 
YDRVWTEDAR RDQIARELAG KHNVDVVAAR GLIAMAAPLA YHEIKSLSGT TPVPQFLNEN
IDSYQRHIPV WATAVLPVGV IAAAPVSTGA HISDTVSTAP LQHEAEKDGS FMKALLPIIG
LIILGALAWA LLRGCQDKPE PVGMPIVTAQ QAANSDGQAV AANMAPASLR ITTGENSELY
ACRMDVGNDT LQSNVMTALT SVFGDAANNC RADIDDNFSI DMPATAQLAT ILSIFKNVPN
ASMLVKGDTI TVNAADTAAL NKLVSDLQAA APAMTVIAEG PLNEQTEIAD SLTASEAAMD
NLGQNPDPRD VARALSLQVV NFEVDKALIP DANKALLDRA VKLMEQVPNM TLMIIGHTDK
TADAAYNLKL SEERAQAMKA YLVAQGADPS KLMTKGMGET DPIADNTTDQ GRFRNRRIEF
VVYDETTTAN DGLAISNDAL DPDLNPLDSD NDDLMPDADD ASRGTALDSA ANN