Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0280 |
Symbol | |
ID | 3514174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 338964 |
End bp | 340565 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637668967 |
Product | OmpA family outer membrane protein |
Protein accession | YP_263584 |
Protein GI | 71064857 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTA TCAGTCATTT GACACGGACA GTCAGTCCAG CAGTACTTGG AGACGATCAC AATCCCGCCA AGAAGAATTT GCTTGAACAG TTTTATGCTA TTTTTGCGGC GCGTCTAGCA GACAATCAGA CCCATGACCG TTTTGCCAAT GAAACGATTG CTCGCGATGA CCAAGGTTTT TATGATCGTG TATGGACAGA AGATGCGCGT CGTGATCAAA TTGCCCGTGA GCTTGCTGGT AAGCACAACG TCGATGTGGT GGCTGCTCGT GGCTTAATTG CCATGGCAGC GCCGCTTGCT TATCATGAAA TCAAAAGTTT GTCAGGCACG ACTCCTGTAC CTCAATTTTT AAACGAAAAT ATTGACAGTT ATCAGCGTCA TATCCCTGTA TGGGCAACGG CTGTATTGCC TGTTGGCGTG ATTGCTGCTG CCCCTGTTTC TACTGGAGCG CATATATCAG ATACGGTAAG CACAGCGCCG CTACAGCACG AAGCAGAAAA AGATGGTAGC TTTATGAAAG CGCTATTACC CATTATTGGA CTGATTATTT TAGGTGCTTT GGCGTGGGCA CTATTAAGAG GCTGCCAAGA CAAGCCTGAG CCGGTCGGCA TGCCAATTGT GACAGCGCAG CAAGCAGCGA ATAGTGATGG ACAGGCGGTT GCGGCTAATA TGGCACCAGC ATCATTGCGT ATTACCACTG GTGAAAATAG TGAGCTATAT GCTTGCCGTA TGGATGTGGG TAATGACACG CTACAGAGCA ATGTTATGAC GGCACTGACT AGCGTGTTTG GTGATGCCGC TAATAATTGC CGAGCAGATA TCGATGATAA TTTCTCAATT GATATGCCAG CGACTGCGCA GCTTGCCACT ATTTTGTCTA TTTTTAAAAA CGTCCCAAAT GCTAGTATGT TGGTTAAAGG CGATACGATT ACAGTCAATG CTGCTGACAC TGCCGCTTTA AATAAATTGG TATCTGATTT ACAAGCTGCT GCGCCAGCGA TGACGGTTAT TGCTGAAGGT CCGCTCAATG AGCAAACTGA AATTGCTGAC AGCTTAACAG CGTCTGAGGC AGCAATGGAT AACTTGGGTC AAAACCCAGA TCCTCGTGAT GTAGCTCGCG CCTTAAGTCT ACAAGTGGTC AATTTTGAAG TAGATAAAGC GTTGATTCCT GACGCCAACA AAGCGCTATT GGACCGTGCT GTGAAGCTGA TGGAACAGGT GCCCAATATG ACACTGATGA TTATTGGCCA TACCGACAAA ACAGCGGATG CTGCCTATAA TCTAAAGCTA TCAGAAGAGC GTGCTCAGGC AATGAAGGCA TATTTGGTCG CACAAGGTGC TGATCCCAGT AAGCTTATGA CCAAAGGTAT GGGTGAGACC GATCCTATAG CGGACAATAC GACAGACCAA GGTCGTTTCC GTAACCGCCG TATCGAGTTT GTGGTCTATG ACGAAACGAC TACGGCCAAT GATGGCTTAG CAATTAGTAA TGACGCGCTT GACCCAGATC TAAATCCATT AGACAGCGAT AACGATGATT TGATGCCAGA CGCTGATGAT GCAAGCCGTG GTACTGCATT GGATTCAGCT GCCAACAACT AA
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Protein sequence | MDIISHLTRT VSPAVLGDDH NPAKKNLLEQ FYAIFAARLA DNQTHDRFAN ETIARDDQGF YDRVWTEDAR RDQIARELAG KHNVDVVAAR GLIAMAAPLA YHEIKSLSGT TPVPQFLNEN IDSYQRHIPV WATAVLPVGV IAAAPVSTGA HISDTVSTAP LQHEAEKDGS FMKALLPIIG LIILGALAWA LLRGCQDKPE PVGMPIVTAQ QAANSDGQAV AANMAPASLR ITTGENSELY ACRMDVGNDT LQSNVMTALT SVFGDAANNC RADIDDNFSI DMPATAQLAT ILSIFKNVPN ASMLVKGDTI TVNAADTAAL NKLVSDLQAA APAMTVIAEG PLNEQTEIAD SLTASEAAMD NLGQNPDPRD VARALSLQVV NFEVDKALIP DANKALLDRA VKLMEQVPNM TLMIIGHTDK TADAAYNLKL SEERAQAMKA YLVAQGADPS KLMTKGMGET DPIADNTTDQ GRFRNRRIEF VVYDETTTAN DGLAISNDAL DPDLNPLDSD NDDLMPDADD ASRGTALDSA ANN
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