| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0267 |
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| Symbol | pilT |
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| ID | 3514127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 321690 |
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| End bp | 322742 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637668954 |
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| Product | pilus retraction protein PilT |
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| Protein accession | YP_263571 |
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| Protein GI | 71064844 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAC AAAATTTAAG AATTGAAGAC TTGCTGCGTT TTGCCGTCAA GCTTAAGGCT
TCAGATTTAC ATATTTCAGC CGGTATGCCT GCGATGATTC GAGTCGATGG CGAGATGACT
CGGATTAATA TGCCAGAGAT GAGTCATAAA GTGGTGCATC AACTCATTTA TGACATCATG
AATGATAGAC AACGTGCCGA CTTTGAAGAA TTTTTTGAGA CGGATTTTTC TTTTGAGATT
CCAGATTTGG CCCGTTTTCG GGTAAACGCA TTTAATCAAA ATCGCGGTGC AGGCGCTGTC
TTTCGTACGA TTCCATCCAA AATTCTGACC ATGGAAGATC TAGGTATGGG AGAAGTTTTT
AAGCGTGTCT CAGACTTTAA GCGTGGCGTG GTATTGGTCA CTGGTCCAAC CGGCTCAGGT
AAGTCGACCA CACTGGCGGC CATGATTGAT TATATCAATG AAACCCGTAA AGAGCATATC
TTGACCATTG AAGACCCGAT TGAATTTGTT CATGAGTCAA AAAAGAGCTT AATTAACCAG
CGTGAAGTAC ACCGCGACAC CTTAGGTTTC GAACCGGCAT TGCGCTCAGC TTTACGTGAA
GATCCTGATA TTATTCTAGT TGGTGAGCTA CGTGACCTTG AGACCATACG CTTAGCGCTC
ACTGCCGCTG AAACCGGACA CTTAGTCTTT GGAACTTTAC ACACCAGTTC CGCTGCCAAA
ACCATTGACC GTGTGATCGA CGTATTCCCT GCTGCTGAAA AAGACATGAT TCGAGCAATG
CTATCAGAGT CACTACAAGC AGTGGTCTCG CAAACGCTTT TACGTCGTCA AACAGGCGGG
CGAGTTGCCG CGCATGAGAT TATGCTGGGT ACGCCCGCTA TTCGTAACTT GATACGTGAA
AACAAAATTG CTCAAATGTA TTCTGCTATC CAAACGGGTG CTGGTGATGG CATGATTACT
CTCGATCAAG CCCTTAAAAA TCTTGTAGCG AGAGGCACCA TTAGCAAAGA CGTTGCACGA
CCTTATGCTA AGCAGCCTGA AGCCTTTTTA TAA
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| Protein sequence | MAEQNLRIED LLRFAVKLKA SDLHISAGMP AMIRVDGEMT RINMPEMSHK VVHQLIYDIM
NDRQRADFEE FFETDFSFEI PDLARFRVNA FNQNRGAGAV FRTIPSKILT MEDLGMGEVF
KRVSDFKRGV VLVTGPTGSG KSTTLAAMID YINETRKEHI LTIEDPIEFV HESKKSLINQ
REVHRDTLGF EPALRSALRE DPDIILVGEL RDLETIRLAL TAAETGHLVF GTLHTSSAAK
TIDRVIDVFP AAEKDMIRAM LSESLQAVVS QTLLRRQTGG RVAAHEIMLG TPAIRNLIRE
NKIAQMYSAI QTGAGDGMIT LDQALKNLVA RGTISKDVAR PYAKQPEAFL
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