Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0232 |
Symbol | comF |
ID | 3514715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 277687 |
End bp | 278529 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637668920 |
Product | competence protein F |
Protein accession | YP_263537 |
Protein GI | 71064810 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCTT TAGCATCTTA TCAAAGCGGA CTATGGCTGG CAGAGTATCT TAGTATACGC TGTCAGCTAT GCCGCGTTTA TCGTAGTACC CCGCAATCAC AGCTTTTACA AAACCTTTCT TTATCAAACC ATTCATTATT CAGTCAAAAC AGCTTATTAG CCGAAAACAC ATCGCACTCT TTATCAAATA ATCATTCTTT CTTTACTAAT ATACGAAAGC AATTCCATAG CCGTTGTAGC AGCGGACTGT TATGCACCAG CTGCCATAGC AGTATTTCGT GGTTACCCAC GCCTTTTCAG GTTGATATTG CTGCTGACAC CACGCTGCCC ATACAAGCGG CGACCTATTA TGACTATCCC ATGCGCCAAG CTATTAGAGC CTTTAAGCAT CATGAGGATA TGACCAAGCT GCCGTTATTG TTACATGCGT TACGCCAGCT ACCACGTCCT CATGGTTGCC ATCAGGATAA TAGCGTGATT GTCGCTATGC CAACGACTGA TGAGCGTCTC ATCAAACGTG GCTTTGATCC TGTCAGTATC TTGGCTGCAC ATTTATCTAA GCACTGGGAT ATTCCTTTAT GGCAAGGTAT TAAGCGTATT GATAATACGC TCAGTCAGCA AGGACTGACA CGTGCCGAAC GCTTAAGCAA TTTAAACAAT GCCTTTATTT TAATTGAGCC TTCTCCCGTT AAACGCCTGA TCTTATTTGA TGATGTGGCA ACTACGGGGG CAAGTCTACA AGCTTTAGCT CGCACCCTGT CAATTTACCC TGCAACAACC CATAACGCCA ATAATAAATG CCATCTGTAT GCCTATGTAT TAGCACATGG CAGCCAGTCA TAG
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Protein sequence | MPALASYQSG LWLAEYLSIR CQLCRVYRST PQSQLLQNLS LSNHSLFSQN SLLAENTSHS LSNNHSFFTN IRKQFHSRCS SGLLCTSCHS SISWLPTPFQ VDIAADTTLP IQAATYYDYP MRQAIRAFKH HEDMTKLPLL LHALRQLPRP HGCHQDNSVI VAMPTTDERL IKRGFDPVSI LAAHLSKHWD IPLWQGIKRI DNTLSQQGLT RAERLSNLNN AFILIEPSPV KRLILFDDVA TTGASLQALA RTLSIYPATT HNANNKCHLY AYVLAHGSQS
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