Gene Psyc_0226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0226 
Symbol 
ID3514706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp266672 
End bp268168 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content43% 
IMG OID637668913 
Productendonuclease 
Protein accessionYP_263533 
Protein GI71064806 
COG category[V] Defense mechanisms 
COG ID[COG1401] GTPase subunit of restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGCAC TTTTTTATAA TTTTTCGCTG GATAATGCTA TGCCTGATGT GTCTAATGAT 
AAGCCGACCA ATATTATTTA TACGGGCGTC GCGGGTACGG GTAAAACCTA CCGATTACTC
CAAATCTCTA AAGAATATAC GGATTATCTG ACCAGAGCCA ATGATGAGGA TTTGCTCAAG
CAGTTATTGC AAGATTTGAG CTGGCGTGAC GTTGTCTGTT TAGTATTTTT AGATTTTCAA
TCGCAAAAAC AAGACTTAGT AAAAGTACCT GAAATCGTCA ATCATGAGTT TTTTGTCGCC
AAAGCGGCGC AAAACGCACG TGAGAAGAAT TTAAGTAATA CGGCATGGAC TGTGCTGCAA
ATGCACAGTC CAACCAGCTC ACAAACCGTT ACGTATAAAA ATAGAGCCAG CCAAGCTTAC
TTTGATAAAG ATCATAGCGG TGCTTGGTAT TTATTGCCTG ACAGCATGAT GTTATTAAGC
GCATTGTCAG AGCAATTGTC AGAATTTCAG CAGGCGCAGT ATGACAATAA TGCCAGCCAA
CATGCGCCCT CTCAGCAGCA GCGCTTTAGT ATGGTCAGCT TTCATCAAGC GTATGGTTAT
GAAGAGTTTG TCGAAGGCAT TCGCCCAATG ATGGCAGCCT CTAATCAGTC GAATAACAGC
CTGTCTCAAA TGAGCTACGG CATTATAGAC GGCGCATTTT TAAAATTGTG CCAGCGCGCT
GCTAATGATC CTCAGCAGCG TTATGCCATG CTGATTGATG AGATCAATCG TGCCAACGTC
TCACGCGTTT TTGGTGAATT ACTCAGCCTT ATTGAACCTG ATAAACGAGT GGGTACAGCC
AATGCGATGA CGGTGAATTT GGCATACTCT GGGCGAACAT TTGGTGTGCC TGCCAATGTT
GATATTTATG CGACCATGAA TACCCAAGAT CATTCTTTAG CACCACTAGA CATGGCACTG
CGTCGACGTT TTCGATTTAT TAACTGCCCG TCGCAGCCTG AGCTGCTGCC GATTATAAGT
CTTAGCAAAG CGTCAAAAAT ACCAAACGCA GCGGAGTCCA TCGATTTAGC CAAAGTATTG
ACGGGTTTAA ATCTTCGTAT TAGCCAAACA CTAGGGATTG AGGCGCAATT GGGTCATGCG
TTTTTGTTCT CTGTGCATAG TCTTGAGCAG TTACAAATAG TATTGGTTGA ACAAATCATT
CCGCAATTAG CCCAAGCAGC AGGTGGGCAA GTTGCCACCT TGCAATATAT CTTTAAAGAT
GAACAGCAGC CGATGCAGGC GCAATTTATT CATGATAGCC AAACGTTAAT GAATAATGAT
ATATCCAATC GAATAGCTAG CCAGAATACT ATAGCCGCTC AACACTCAAT GTTTGCAGGA
CAGCAATCCT ATTTTGCTCA GTCTATGCAT ACAGGTAGTT ATGCAATTAA TACTGACCTT
ATTGCCAAGA CTGGCGAGTT TGCCAATACC GCCGTCTATC AGCGCTTATA TCCATGA
 
Protein sequence
MLALFYNFSL DNAMPDVSND KPTNIIYTGV AGTGKTYRLL QISKEYTDYL TRANDEDLLK 
QLLQDLSWRD VVCLVFLDFQ SQKQDLVKVP EIVNHEFFVA KAAQNAREKN LSNTAWTVLQ
MHSPTSSQTV TYKNRASQAY FDKDHSGAWY LLPDSMMLLS ALSEQLSEFQ QAQYDNNASQ
HAPSQQQRFS MVSFHQAYGY EEFVEGIRPM MAASNQSNNS LSQMSYGIID GAFLKLCQRA
ANDPQQRYAM LIDEINRANV SRVFGELLSL IEPDKRVGTA NAMTVNLAYS GRTFGVPANV
DIYATMNTQD HSLAPLDMAL RRRFRFINCP SQPELLPIIS LSKASKIPNA AESIDLAKVL
TGLNLRISQT LGIEAQLGHA FLFSVHSLEQ LQIVLVEQII PQLAQAAGGQ VATLQYIFKD
EQQPMQAQFI HDSQTLMNND ISNRIASQNT IAAQHSMFAG QQSYFAQSMH TGSYAINTDL
IAKTGEFANT AVYQRLYP