| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0214 |
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| Symbol | ygjD |
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| ID | 3514788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 252902 |
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| End bp | 253951 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637668901 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_263521 |
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| Protein GI | 71064794 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0646076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00239069 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGTAT TGGGTTTAGA GACTTCTTGT GATGAGACCG GTCTGGCGAT TTTCGATAGC
GAACAGATAA ATAGCGAGAA TAAAGGTCTG CTTGGGCAAG TATTGTATTC ACAAATAGAG
CTGCACGCCC TTTACGGCGG CGTTGTGCCT GAGCTTGCCA GTCGCGATCA TATTCGTAAG
CTGGTGCCTC TGTTTAATGA GCTGTTGGCC CAATGTAATA TCAGCAAAGA TGAGATTGAT
GCTATCGCTT ATACCAAGGG TCCGGGGCTT ATCGGCGCGC TGATGACGGG TGCATTGTTT
GGTCGTAGCT TGGCTTATGG TCTAGATATT CCAGCGATTG GCATTCATCA TATGGAAGGG
CATTTATTGG CACCGCTGAT GGGTCTCAAT CCACCAGCGT TTCCATTTGT GTCGCTATTA
GTGTCCGGTG GACATACGCT ACTCATTGCC GCCCACGGTA TCGGACAATA TGAAATCCTC
GGCGAGTCCA TCGATGATGC GGCGGGCGAA TGTTTTGATA AAGCCGCAAA GATGTTGGGC
TTGCCCTATC CGGGCGGTCC TAATATTGCT AAATTGGCGG AAAACGGCAA TCCGAATGCT
TATAGTCTGC CCAGACCGAT GTTACATCGC GGTTTGGATT TTTCTTTTAG CGGTATGAAA
ACGGCTGTGC ACAATCTTAT CAAGGACACT GACGGTTCAG GAAATGGTTC TGATAGCGAC
CCGCAAGTCC GCGCTGATAT TGCTGCCAGT TTTCAGCATG CTGTCGTTGA TACCTTGGTG
AAAAAATGCG TCAAAGCGCT TAAGCAAGTG GATATGAGCC GATTGGTAAT AGCAGGCGGT
GTCAGTGCCA ATAGCCATTT GCGTGAAACT CTCGAGCGTG AGCTGGCTAA AATCAATGCC
ACTGTTCATT ATGCGCCGCC TGCTTTATGT ACTGATAATG GTGCAATGAT TGCTTATGCC
GGTTATGAGC GTTTGCAAGC AGGGCAGTCC GATGATTTAG CGGTGAGCTG TGTGCCACGT
TGGCCAATGA CAGAACTGCC TGCGGTTTAA
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| Protein sequence | MKVLGLETSC DETGLAIFDS EQINSENKGL LGQVLYSQIE LHALYGGVVP ELASRDHIRK
LVPLFNELLA QCNISKDEID AIAYTKGPGL IGALMTGALF GRSLAYGLDI PAIGIHHMEG
HLLAPLMGLN PPAFPFVSLL VSGGHTLLIA AHGIGQYEIL GESIDDAAGE CFDKAAKMLG
LPYPGGPNIA KLAENGNPNA YSLPRPMLHR GLDFSFSGMK TAVHNLIKDT DGSGNGSDSD
PQVRADIAAS FQHAVVDTLV KKCVKALKQV DMSRLVIAGG VSANSHLRET LERELAKINA
TVHYAPPALC TDNGAMIAYA GYERLQAGQS DDLAVSCVPR WPMTELPAV
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