| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0200 |
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| Symbol | dapF |
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| ID | 3514536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 239291 |
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| End bp | 240178 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637668887 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_263507 |
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| Protein GI | 71064780 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000663087 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTAATAG AATTTACTAA GATGCATGGG TTGGGCAATG ACTTTATGGT CATCGATTTG
GTGACTCAGC GTTTGGACTT AACCAAGGAT TTGGTACAGT TATTGGGTGA TCGTCATTTA
GGTATTGGTT TTGATCAACT GTTGGTGGTC GAGCCGCCGA TGCGCCCCGA CGTTGATTTT
AGTTATCGTA TTTTTAATAC TGATGGTACA GAGGTTGAGC AATGCGGCAA CGGCGCCCGC
TGTTTTGCCC GTTTTGTTCA AGCGCGCAAG TTATCATTTA AGCAGCGTCT CCGTGTTGAG
ACGGCGAGCG GCATTATTTC ACTGACGACC GACCATTATG GCTGGGTCGA AGTTGATATG
GGTAAGCCCA AGTTTGAGCC AAGCGAGATT CCATTTACCC CAAGAGCCAC CACCAAAATC
CAAAATGCCT ATCATCTGGA CGTGAATGGT ACGCCTGTGC AGCTTTATGT TGCCAATATG
GGCAATCCGC ATGCGGTCAT CAAAGTTGAT GATGTGCTTG ATGCCGACGT TGAAAGCTTA
GGCAGAGCCA TCGAATCACA CCCTGCCTTT CCAGAACGCG TCAATGTCGG TTTTATGCAG
GTAATGAACC AACGTCATAT TCGTCTGCGA GTGTATGAGC GCGGTGTTGG TGAGACACAA
GCCTGTGGTA CGGGCGCTTG TGCAGCCGTT GCCATCGGCA TACGTGAAGG ATGGCTTGAC
GAAGGCGAAG ATGTACGTGC CCAGCTCTAT GGCGGTAGCA TGGTTATCAA ATGGCAGCCG
GGTTATTCTG TCATGATGAC CGGACCAACT GCGTTTGTGT ATGAAGGTGT TTTTAGTCCA
GATGGCTTGA TGGCACAAGC TGGTATCAAG CCCAATCCAG AAATTTAA
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| Protein sequence | MLIEFTKMHG LGNDFMVIDL VTQRLDLTKD LVQLLGDRHL GIGFDQLLVV EPPMRPDVDF
SYRIFNTDGT EVEQCGNGAR CFARFVQARK LSFKQRLRVE TASGIISLTT DHYGWVEVDM
GKPKFEPSEI PFTPRATTKI QNAYHLDVNG TPVQLYVANM GNPHAVIKVD DVLDADVESL
GRAIESHPAF PERVNVGFMQ VMNQRHIRLR VYERGVGETQ ACGTGACAAV AIGIREGWLD
EGEDVRAQLY GGSMVIKWQP GYSVMMTGPT AFVYEGVFSP DGLMAQAGIK PNPEI
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