| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0147 |
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| Symbol | mucD |
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| ID | 3514513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 175485 |
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| End bp | 176942 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637668831 |
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| Product | serine protease |
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| Protein accession | YP_263455 |
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| Protein GI | 71064728 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000224788 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCAATCG ACATGTCTAA ATCGAAAATC ACTACAGCTA TCATGCAGCG CTTGCTTCAA
CGCAGCACAT TGGCAATCGC TGTCGCTACT ACTATGGTCG TTGGTATTAA CCTAAACACC
ATGCCAAGCG CGCAAGCTGC TGTCACCACC GCTGATTTTT CAGGATTGGT GCAGCAAGTC
ACGCCAGCGG TGGCACGCGT CAATGTGACC AAAACTGTGA GTGAGGCCGA ACTTGCAAAA
GCCCAAACGG CTGAGCTGTT ACGCAAATTC TTTGGTGATC GCCTGCGTAT CCCTGATCAA
GCAGCGACGC CAGCGATTGA GCATGCTTAT GGCACGGGGT TTTTTGTGAC CGATGATGGT
TATATGCTGA CCAATCACCA TGTGGTGGCG GGCGCAGACA AAATCACTGT GACCCTCAAT
GACAGAACAG AGCTTGATGC TACCTTGGTT GGCAGTGATG AGCGCTCGGA TGTAGCAGTA
TTAAAGGTTA CAGGCAAAAA ATTCCCAGCG CTACCGATTG GTGATTCTAA TAGCCTAAAA
GTCGGTGAGC CGGTACTGGC TATTGGCTCG CCATTTGGTT TTGACTATTC AGCGTCGGCA
GGTATTGTTA GCGCCAAATC ACGCAATTTT TCGCGTGAAA CCAGTGTGTC ATTCATTCAA
ACCGATGTGG CATTGAATCC TGGTAATTCA GGTGGACCGT TATTTAACCA GCGCGGTGAA
GTGATTGGGA TTAATTCACG TATTTTTAGT GGAACCGGTG GTTATATGGG GCTGTCGTTC
TCCATCCCGA TTGATGCGGC GATGGATGTT TATGAGCAGC TCAAAGCCAA TGGTAAGGTT
GAGCGTGCCT ATTTGGGCAT TTATCCGCAA GATATTGATC GTAATTTGGC TGAAGCTTAT
AACCTAGCGC GTCCGCAAGG GGCATTACTG ACACGCGTGT CACCCGATTC ACCTGCCCAA
AAAGCAGGGC TAAAATCAGG GGATATTATT TTACGCTACA ATGATGTCCA AATTATGGAA
GCCTCTGACC TATTAAACCT GATTAATCGC GCGCGTCCCA ATGACACCTT TCGCATGCAG
ATTCAGCGCA ATGGCAAGCA ATCTCTCGTC ACTGGCAAGC TTAGTGACGC CTCAAATGAC
ATGCAGTCAC AAAACCGTGG TCAGCAAAAT AACGAGATAA GTCTGGGCTT AGCATTACGT
AATCTGACCC CAGAGGAACA AGTAGAGTTG GCCTCTGATA ATAAAACCGG CGTTTTGGTC
ACAGCGATTG AGCCAACAGG ATTGGCGGCA CGCTCGGGCA TACTAGCAGG CGATATCATT
ACTAATCTAC ATCAAAAATC GATTAAAACC GTCAATGATG TTTCGAGTGC CGTGTCGGTA
TTGCCTAAAA AAGGGGTGGT GACGATTGAG GTGATGCGTC AAGGTATCCC TGGTATTATT
GGATTACGCA TAGAGTAA
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| Protein sequence | MPIDMSKSKI TTAIMQRLLQ RSTLAIAVAT TMVVGINLNT MPSAQAAVTT ADFSGLVQQV
TPAVARVNVT KTVSEAELAK AQTAELLRKF FGDRLRIPDQ AATPAIEHAY GTGFFVTDDG
YMLTNHHVVA GADKITVTLN DRTELDATLV GSDERSDVAV LKVTGKKFPA LPIGDSNSLK
VGEPVLAIGS PFGFDYSASA GIVSAKSRNF SRETSVSFIQ TDVALNPGNS GGPLFNQRGE
VIGINSRIFS GTGGYMGLSF SIPIDAAMDV YEQLKANGKV ERAYLGIYPQ DIDRNLAEAY
NLARPQGALL TRVSPDSPAQ KAGLKSGDII LRYNDVQIME ASDLLNLINR ARPNDTFRMQ
IQRNGKQSLV TGKLSDASND MQSQNRGQQN NEISLGLALR NLTPEEQVEL ASDNKTGVLV
TAIEPTGLAA RSGILAGDII TNLHQKSIKT VNDVSSAVSV LPKKGVVTIE VMRQGIPGII
GLRIE
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