Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0114 |
Symbol | |
ID | 3514484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 135879 |
End bp | 138116 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637668798 |
Product | hypothetical protein |
Protein accession | YP_263422 |
Protein GI | 71064695 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00228861 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGC GTGCCGCCAA GCAGTTAGAA CTGAATAAAT CTGAATTACC CAATTCCATT ACCGAAGTAA TCGCTACCCT AACCCGAGCT GGGTTTGACG CCTATATCGT CGGTGGAGGC GTGCGTGATA CCTTGCTAGG TCTGCGTCCA AAAGATTTCG ATGCGGTCAC TGATGCCAAG CCTCATGAGA TTAAAGACGT CTTTGGTAAA CGCTGCCGTA TTATCGGTCG CCGTTTTCAG TTAGCGCATG TGTACTCTGG ACGTGAGCTT ATCGAAGTGG CGACCTTTCG TGGTCCACCT ATCAATGATT CCAATACCAA TCAAGATGGT ATGATTTTGC GCGACAATGT CTGGGGCGAT ATCAAACAAG ATTTTGCCCG TCGTGATTTT TCTATCAATG CCCTTTATTA TCAACCGCTC AAAGGTGTGG TTCATGATTT TTGCGGGGCG CTTGAAGATA TTGATAATAA AATTATTCGC CTGTTAGGTA ATGCACCGAT TCGTATCGAA GAAGATCCGG TTAGATTGCT GCGTGCGCTA CGCTTTAAAG CCAAGTTGGG CTTTGATTTT GATAGCGAAT TAGCTGCACA GTTCCATGAT GGCAATTGGT CGCTACTTGA GCAGATTTCT CCGCATCGTC TTTATGATGA AACGCAAAAG ATGTTTACTG GTGGCTATTT AGTACCATTA TTGCCGTTAT TGTTTGAGTC AGGCGCAATT GATAGCTTAA TCATTTATCC ACCCTCTGAG CCGAGCGCGC TTGTGCAGCA AGTGGCTATC AATACCGATA AACGTATTGG CGCTGGCAAA AGCATCAATC CAGCTTTCTT TTATGCTGCT TTGCTGTGGG AAAATTATTT ACATCAATTA GAAAAAGCCA AAAAGCGCAA TATGCCTTTT GCGGACGCCC AAATGCATGC AGCAGGCAAA GTGATTGATC GTCAACGTAT TAAGACCGCC ATTCCTAAGT TTGCTGAACA GTTTATCCGT GATATCTGGA TATTGCAGCC AAAATTAGCC GCGCCGCGTA GCAAACAAAT TGTGCAATTG TCTGAGCATC CACGTTTTCG TGCCGGTTTT GATTTCTTGT TATTGCGCGA GCAGTGCGGC GATGCTGAGC ATCCGCTTTC TGAATCGACC AATGATATGG GCGAGTGGTG GCAGACCTAT CAAACCTTGT CTGAGCAGCA ACAAGATGAA GCGATTGAGG GTTTTGATGA AAATATACGC CGCGGTGCTT ATAAACAAGG TCAACGTGGT CGTGGACGCA ATCGTCAAAA GCAGCAGAAT TCAAATGACA ATGCTAAGCC AAATCAGATA GATAATGACT ATCAAGATAA AGCGCTGAGC AATGGCAATC CAAAATCAGT GATGGTCAAT GATGCCTCAA ATGTGCCATC ACGTCGCCGC CGTGCCAGTC AGCATACATC TGTTAACCAA AAAAACAAAG GTTACAGCCC GCAGCAAGTC GCACAAGACA ATAATGAGCT GGCACAGTTG CAGCAATTGT CTTTGGCGAG CAGTAATAAT GGTAGCAATC AGCAGCATAC GCTAAAACCT GCACCACTGT TTGTTATCGA GCATGGCAAC GTTGTACCGC CTCTTAAAAA GCAGTTGTCT GGTTCAGAAA AAATCTTGCC TAGAGCGCCG CAAAAAGCGC CTATGCAAGA AACAGCTGGC AAAAAAGTAT CGGCTGACAG TCAATTTCGG CCGCCAGCAA AAGCTGCTGA TAAAGTAAAT GCTTCAAAAA GTCGATTGCA TACGCAACAA GCATTAATTG AAACTCAGTC ATCTTCGAAT AATGCGCGCA CCATCGTTCA TGCAGAGCGC AACGCTGCGC AATCGCCAGC GCTTGTCAGT ATGAACAATG AGCCGATACC GCATAAGCGT CGTCGTCGTC AGCCTACTGT GATTGAAAAT AGTGGTACTG TCGCAGAAGT TAGTAGTACT AAAAAAGCAG TGGAAATAGA CACTAATAGT AATGACAAAT CAGCTGGCAA GTACGCAAAA AAAGCGCCTA AACCAGCTGC TGACTCTACT GATAACGCCA TTGCTAAAGC GCCGAAACCC GTTAAAGCAT CAAGCGCTAA GCTTGCTAAA GCTAATCGAG ATACTGGTAT TCAAAGTGCT ACTGTACAGA TAGATGCTAA TAAGACAGTT AATAGTAATA TGCATGCCAA TAAAGGCCCT GTACCATCGA AACGTCGCCG TCGTCAGCCA AGTACTGGTG ACATCTGA
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Protein sequence | MAERAAKQLE LNKSELPNSI TEVIATLTRA GFDAYIVGGG VRDTLLGLRP KDFDAVTDAK PHEIKDVFGK RCRIIGRRFQ LAHVYSGREL IEVATFRGPP INDSNTNQDG MILRDNVWGD IKQDFARRDF SINALYYQPL KGVVHDFCGA LEDIDNKIIR LLGNAPIRIE EDPVRLLRAL RFKAKLGFDF DSELAAQFHD GNWSLLEQIS PHRLYDETQK MFTGGYLVPL LPLLFESGAI DSLIIYPPSE PSALVQQVAI NTDKRIGAGK SINPAFFYAA LLWENYLHQL EKAKKRNMPF ADAQMHAAGK VIDRQRIKTA IPKFAEQFIR DIWILQPKLA APRSKQIVQL SEHPRFRAGF DFLLLREQCG DAEHPLSEST NDMGEWWQTY QTLSEQQQDE AIEGFDENIR RGAYKQGQRG RGRNRQKQQN SNDNAKPNQI DNDYQDKALS NGNPKSVMVN DASNVPSRRR RASQHTSVNQ KNKGYSPQQV AQDNNELAQL QQLSLASSNN GSNQQHTLKP APLFVIEHGN VVPPLKKQLS GSEKILPRAP QKAPMQETAG KKVSADSQFR PPAKAADKVN ASKSRLHTQQ ALIETQSSSN NARTIVHAER NAAQSPALVS MNNEPIPHKR RRRQPTVIEN SGTVAEVSST KKAVEIDTNS NDKSAGKYAK KAPKPAADST DNAIAKAPKP VKASSAKLAK ANRDTGIQSA TVQIDANKTV NSNMHANKGP VPSKRRRRQP STGDI
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