Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0099 |
Symbol | sdhD |
ID | 3514469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 114609 |
End bp | 115013 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637668783 |
Product | succinate dehydrogenase subunit D |
Protein accession | YP_263407 |
Protein GI | 71064680 |
COG category | [C] Energy production and conversion |
COG ID | [COG2142] Succinate dehydrogenase, hydrophobic anchor subunit |
TIGRFAM ID | [TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACG ATTCAGGAAT CAAAAGCGCA ACCAGTCTAA CCGGCTCAGG TTCACGTGAT TGGATTGTCC AGCGTATCAG TGCGGTGGTC TTGGCAGTTT ACAGTGTGGT GCTACTGGGC TTCTTTTTGA CCCATGGCGA TGTCACTTAT ACTGAATGGT CAAACTTTAT GACTAGCCTA CCAATGCGTC TGTTTAGCTT AGTGGCAGTT CTAGCCCTTG CCGGTCACGC ATGGATTGGC ATGTGGACCG TATTTACTGA CTATATCACT ACAGGCAAAC TGGGCGCGAG CGCAGCGGGT CTACGTCTGG TATTACAGAC CTTAATGATT ATTGCCGTTT TAGTATTTTT ATTCTGGGGC ATCATGATTT TTTGGGGTAA TGGCTTCGGT GTCGTTGCTG TTTAA
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Protein sequence | MKNDSGIKSA TSLTGSGSRD WIVQRISAVV LAVYSVVLLG FFLTHGDVTY TEWSNFMTSL PMRLFSLVAV LALAGHAWIG MWTVFTDYIT TGKLGASAAG LRLVLQTLMI IAVLVFLFWG IMIFWGNGFG VVAV
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