Gene Psyc_0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0099 
SymbolsdhD 
ID3514469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp114609 
End bp115013 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content46% 
IMG OID637668783 
Productsuccinate dehydrogenase subunit D 
Protein accessionYP_263407 
Protein GI71064680 
COG category[C] Energy production and conversion 
COG ID[COG2142] Succinate dehydrogenase, hydrophobic anchor subunit 
TIGRFAM ID[TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACG ATTCAGGAAT CAAAAGCGCA ACCAGTCTAA CCGGCTCAGG TTCACGTGAT 
TGGATTGTCC AGCGTATCAG TGCGGTGGTC TTGGCAGTTT ACAGTGTGGT GCTACTGGGC
TTCTTTTTGA CCCATGGCGA TGTCACTTAT ACTGAATGGT CAAACTTTAT GACTAGCCTA
CCAATGCGTC TGTTTAGCTT AGTGGCAGTT CTAGCCCTTG CCGGTCACGC ATGGATTGGC
ATGTGGACCG TATTTACTGA CTATATCACT ACAGGCAAAC TGGGCGCGAG CGCAGCGGGT
CTACGTCTGG TATTACAGAC CTTAATGATT ATTGCCGTTT TAGTATTTTT ATTCTGGGGC
ATCATGATTT TTTGGGGTAA TGGCTTCGGT GTCGTTGCTG TTTAA
 
Protein sequence
MKNDSGIKSA TSLTGSGSRD WIVQRISAVV LAVYSVVLLG FFLTHGDVTY TEWSNFMTSL 
PMRLFSLVAV LALAGHAWIG MWTVFTDYIT TGKLGASAAG LRLVLQTLMI IAVLVFLFWG
IMIFWGNGFG VVAV